OSU Department of Biomedical Informatics

Joel H. Saltz M.D., Ph.D.


Project Involvement

Imaging Informatics

Medical Informatics

Multiscale Computing

display all
display all

Publications

click to hide (-)

Olcay Sertel, H Shimada, Umit V. Catalyurek, Joel H. Saltz, Metin N. Gurcan, "Computer-aided prognosis of neuroblastoma: classification of stromal development on whole-slide images", Proc. of SPIE Medical Imaging, Vol. 6915 March, 2008.

Olcay Sertel, Umit V. Catalyurek, Joel H. Saltz, Metin N. Gurcan, G Lozanski, "Computerized microscopic image analysis of follicular lymphoma", Proc. of SPIE Medical Imaging 2008: Computer-Aided Diagnosis, March, 2008.

Scott Oster, Stephen Langella, Shannon L. Hastings, David W. Ervin, Ravi Madduri, Joshua Phillips, Tahsin M. Kurc, Frank Siebenlist, Peter A. Covitz, Krishnakant Shanbhag, Ian Foster, Joel H. Saltz, "caGrid 1.0: An Enterprise Grid Infrastructure for Biomedical Research", Journal of the American Medical Informatics Association, Vol. 15 (2) : pp. 138-149, December, 2007.

Metin N. Gurcan, Olcay Sertel, Berkant Barla Cambazoglu, Joel H. Saltz, Umit V. Catalyurek, "Computerized Pathological Image Analysis For Neuroblastoma Prognosis", 2007 AMIA Annual Symposium, : pp. 304-308, November, 2007.

Scott Oster, Shannon L. Hastings, Stephen Langella, David W. Ervin, Ravi Madduri, Tahsin M. Kurc, Frank Siebenlist, Ian Foster, Krishnakant Shanbhag, Peter A. Covitz, Joel H. Saltz, "caGrid 1.0: A Grid Enterprise Architecture for Cancer Research", Proceedings of the 2007 AMIA Annual Symposium, : pp. 573-577, November, 2007.

display all

Presentations

click to hide (-)

Jeffrey Prescott, Joel H. Saltz, Metin N. Gurcan, Z Donqing, J Wang, N Mayr, W Yuh, "Cancer treatment outcome prediction by assessing temporal change: Application to cervical cancer", in Proceedings of SPIE Medical Imaging Conference 2008, San Diego, California, 2008

Stephen Langella, Scott Oster, Shannon L. Hastings, Frank Siebenlist, Joshua Phillips, David W. Ervin, Justin D. Permar, Tahsin M. Kurc, Joel H. Saltz, "The Cancer Biomedical Informatics Grid (caBIG™) Security Infrastructure", in Proceedings of 2007 AMIA Annual Symposium, Chicago, Illinois, 2007

display all

Tech Reports

click to hide (-)

Sivaramakrishnan Narayanan, Tahsin M. Kurc, Joel H. Saltz, "Support for Spatial Queries in Semantically Annotated Scientific Datasets", Technical Report, No. OSUBMI_TR_2007_n14, Biomedical Informatics, 2007.

Joel H. Saltz, Joyce Niland, Philip R. Payne, Hemant Shah, Douglas Stahl, "Rules Engine Technologies Across caBIG Workspaces - A White Paper", Technical Report, Biomedical Informatics, 2007.


display all

Abstracts

click to hide (-)

Kun Huang, Tony C. Pan, Joel H. Saltz, Manuel Ujaldon, Antonio Ruiz, Jose Antonio Andrades, Jose Becerra, "The GPU on biomedical image processing for color and phenotype analysis", IEEE 7th International Conference on BioInformatics & BioEngineering, Boston, Massachusetts, October 2007

Joel H. Saltz, Tahsin M. Kurc, Stephen Langella, Shannon L. Hastings, Scott Oster, Ashish Sharma, Metin N. Gurcan, "caGrid (Cancer Grid) Middleware- Connecting Healthcare to the Grid", 92nd Scientific Assembly and Annual Meeting of Radiological Society of North America (RSNA), Chicago, Illinois, November 2006

Joel H. Saltz, Tony C. Pan, Ashish Sharma, Tahsin M. Kurc, Stephen Langella, Shannon L. Hastings, Scott Oster, Metin N. Gurcan, "gridImage-Grid Computing to Middleware Support Human Markup and Multiple CAD Systems", 92nd Scientific Assembly and Annual Meeting of Radiological Society of North America (RSNA), Chicago, Illinois, November 2006

Publications

click to hide (-)

Joel H. Saltz, Tahsin M. Kurc, Shannon L. Hastings, Stephen Langella, Scott Oster, David W. Ervin, Ashish Sharma, Tony C. Pan, Metin N. Gurcan, Justin D. Permar, Renato A. Ferreira, Philip R. Payne, Umit V. Catalyurek, Enrico Caserta, Gustavo Leone, M. Ostrowski, Ravi Madduri, Ian Foster, Subhashree Madhavan, Kenneth H Buetow, Krishnakant Shanbhag, Eliot Siegel, "e-Science, caGrid, and Translational Biomedical Research", IEEE Computer, 41 (11) : pp. 58-66, November, 2008.

Joel H. Saltz, Scott Oster, Shannon L. Hastings, Stephen Langella, Renato A. Ferreira, Justin D. Permar, Ashish Sharma, David W. Ervin, Tony C. Pan, Umit V. Catalyurek, Tahsin M. Kurc, "Translational research design templates, Grid computing, and HPC", IEEE International Symposium on Parallel and Distributed Processing., : pp. 1-15, June, 2008.

Antonio Ruiz, Manuel Ujaldon, Kim L. Boyer, Joel H. Saltz, Metin N. Gurcan, "Pathological Image Segmentation for Neuroblastoma Using the GPU", Proceedings IEEE Intl. Symposium on Biomedical Imaging: From Nano to Macro, May, 2008.

Olcay Sertel, Umit V. Catalyurek, G Lozanski, Joel H. Saltz, "Histopathological image analysis using model-based intermediate representations and color texture: Follicular lymphoma grading", The Journal of Signal Processing Systems for Signal, Image, and Video Technology, May, 2008.

Gaurav Khanna, Umit V. Catalyurek, Tahsin M. Kurc, R. Kettimuthu, P. Sadayappan, Joel H. Saltz, "A Dynamic Scheduling Approach for Coordinated Wide-Area Data Transfers using GridFTP", Proceedings of 22nd IEEE International Parallel & Distributed Processing Symposium (IPDPS 2008), : pp. 1-12, April, 2008.

Vijay S. Kumar, Sivaramakrishnan Narayanan, Tahsin M. Kurc, Metin N. Gurcan, Joel H. Saltz, "Analysis and Semantic Querying in Large Biomedical Image Datasets", Computer magazine, issue on Data-Intensive Computing, Vol. 41 (4) : pp. 52-59, April, 2008.

Tony C. Pan, R. Ridgway, R. Sharp, Lee Cooper, Alexandra Gulacy, Ashish Sharma, O. Irfanoglu, Raghu Machiraju, Tahsin M. Kurc, P. Wenzel, A. de Bruin, Gustavo Leone, Joel H. Saltz, Kun Huang, "An Imaging Workflow for Characterizing Phenotypical Change in Terabyte Sized Mouse Model Datasets", Journal of Bioinformatics, April, 2008.

Olcay Sertel, G Lozanski, Umit V. Catalyurek, Joel H. Saltz, Metin N. Gurcan, "Texture classification using non-linear color quantization:Application to histopathological image analysis", Proceedings of IEEE International Conference on Acoustics, Speech and Signal Processing (ICASSP 2008), : pp. 597-600, March, 2008.

Olcay Sertel, Umit V. Catalyurek, Joel H. Saltz, Metin N. Gurcan, G Lozanski, "Computerized microscopic image analysis of follicular lymphoma", Proc. of SPIE Medical Imaging 2008: Computer-Aided Diagnosis, March, 2008.

Olcay Sertel, H Shimada, Umit V. Catalyurek, Joel H. Saltz, Metin N. Gurcan, "Computer-aided prognosis of neuroblastoma: classification of stromal development on whole-slide images", Proc. of SPIE Medical Imaging, Vol. 6915 March, 2008.

Umit V. Catalyurek, Sivaramakrishnan Narayanan, Olcay Sertel, Berkant Barla Cambazoglu, Tony C. Pan, Ashish Sharma, Shannon L. Hastings, Stephen Langella, Scott Oster, Tahsin M. Kurc, Metin N. Gurcan, Joel H. Saltz, "Service-based Access to and Processing of Large Scientific Datasets", High Performance Computing (HPC) and Grids in Action: Advances in Parallel Computing, Vol. 16 March, 2008.

Vijay S. Kumar, Benjamin Rutt, Tahsin M. Kurc, Umit V. Catalyurek, Tony C. Pan, Sunny Chow, Stephan Lamont, Maryann Martone, Joel H. Saltz, "Large-scale Biomedical Image Analysis in Grid Environments", IEEE Transactions on Information Technology in Biomedicine, Vol. 12 (2) : pp. 154-161, March, 2008.

Stephen Langella, Shannon L. Hastings, Scott Oster, Tony C. Pan, Ashish Sharma, Justin D. Permar, David W. Ervin, Berkant Barla Cambazoglu, Tahsin M. Kurc, Joel H. Saltz, "Sharing Data and Analytical Resources Securely in a Biomedical Research Grid Environment", Journal of the American Medical Informatics Association, 15 (3) : pp. 363-373, March, 2008.

Olcay Sertel, H Shimada, Kim L. Boyer, Joel H. Saltz, Metin N. Gurcan, "A multi-resolution image analysis system for computer-assisted grading of neuroblastoma differentiation", Proc. of SPIE Medical Imaging, February, 2008.

Antonio Ruiz, Olcay Sertel, Manuel Ujaldon, Umit V. Catalyurek, Joel H. Saltz, Metin N. Gurcan, "Stroma Classification for Neuroblastoma on Graphics Processors", Int. J. of Data Mining and Bioinformatics, Vol. 3 January, 2008.

Lee Cooper, R. Sharp, Raghu Machiraju, Gustavo Leone, Kun Huang, Joel H. Saltz, "Reconstruction of Cellular Biological Structures from Optical Microscopy Data", IEEE Transactions on Visualization and Computer Graphics, January, 2008.

F. Janoos, O. Irfanoglu, R. Ridgway, Raghu Machiraju, Kun Huang, Joel H. Saltz, Gustavo Leone, M. Ostrowski, "Tensor Classification of N-point Correlation Function features for Histology Tissue Segmentation", Journal of Medical Image Analysis, special issue: Medical Image Analysis with Applications in Biology, January, 2008.

Scott Oster, Stephen Langella, Shannon L. Hastings, David W. Ervin, Ravi Madduri, Joshua Phillips, Tahsin M. Kurc, Frank Siebenlist, Peter A. Covitz, Krishnakant Shanbhag, Ian Foster, Joel H. Saltz, "caGrid 1.0: An Enterprise Grid Infrastructure for Biomedical Research", Journal of the American Medical Informatics Association, Vol. 15 (2) : pp. 138-149, December, 2007.

S. Erdal, Umit V. Catalyurek, Philip R. Payne, Jyoti Kamal, Joel H. Saltz, Metin N. Gurcan, "A Knowledge-Anchored Integrative Image Search and Retrieval System", Journal of Digital Imaging, November, 2007.

Scott Oster, Shannon L. Hastings, Stephen Langella, David W. Ervin, Ravi Madduri, Tahsin M. Kurc, Frank Siebenlist, Ian Foster, Krishnakant Shanbhag, Peter A. Covitz, Joel H. Saltz, "caGrid 1.0: A Grid Enterprise Architecture for Cancer Research", Proceedings of the 2007 AMIA Annual Symposium, : pp. 573-577, November, 2007.

Metin N. Gurcan, Olcay Sertel, Berkant Barla Cambazoglu, Joel H. Saltz, Umit V. Catalyurek, "Computerized Pathological Image Analysis For Neuroblastoma Prognosis", 2007 AMIA Annual Symposium, : pp. 304-308, November, 2007.

Stephen Langella, Scott Oster, Shannon L. Hastings, Frank Siebenlist, Joshua Phillips, David W. Ervin, Justin D. Permar, Tahsin M. Kurc, Joel H. Saltz, "The Cancer Biomedical Informatics Grid (caBIG) Security Infrastructure", Proceedings of the 2007 AMIA Annual Symposium, November, 2007.

Antonio Ruiz, Manuel Ujaldon, Jose Antonio Andrades, Jose Becerra, Kun Huang, Tony C. Pan, Joel H. Saltz, "The GPU on biomedical image processing for color and phenotype analysis", Proceedings IEEE 7th Intl. Symposium on BioInformatics & BioEngineering (BIBE 2007), : pp. 1124-1128, November, 2007.

Antonio Ruiz, Olcay Sertel, Manuel Ujaldon, Umit V. Catalyurek, Metin N. Gurcan, Joel H. Saltz, "Pathological Image Analysis Using the GPU: Stroma Classification for Neuroblastoma", IEEE International Conference on Bioinformatics and Biomedicine (BIBM 2007), : pp. 78-88, November, 2007.

Vijay S. Kumar, Tahsin M. Kurc, Umit V. Catalyurek, Metin N. Gurcan, Joel H. Saltz, "Performance vs. Accuracy Trade-offs for Large-scale Image Analysis Applications", Proceedings of the IEEE Cluster 2007, September, 2007.

Olcay Sertel, H Shimada, Kim L. Boyer, Joel H. Saltz, Metin N. Gurcan, "Computer-Aided Grading of Neuroblastic Differentiation: Multi-Resolution and Multi-Classifier Approach", 5 : pp. V - 525 - V - 528, September, 2007.

Lee Cooper, S. Naidu, Gustavo Leone, Joel H. Saltz, Kun Huang, "Registering high resolution microscopic images with different histochemical stainings - a tool for mapping gene expression with cellular structures", Proceedings of International Workshop on Microscopic Image Analysis with Applications in Biology (MIAAB’07), September, 2007.

F. Janoos, R. Sharp, R. Ridgway, Raghu Machiraju, Kun Huang, P. Wenzel, A. de Bruin, Gustavo Leone, Joel H. Saltz, "Detection and Visualization of Surface-Pockets to Enable Phenotyping Studies", IEEE Transactions on Medical Imaging, Vol. 26 (9) : pp. 1283 - 1290, September, 2007.

Gaurav Khanna, Umit V. Catalyurek, Tahsin M. Kurc, P. Sadayappan, Joel H. Saltz, "Scheduling File Transfers for Data-Intensive Jobs on Heterogeneous Clusters", Proceedings of Euro-Par 2007 Parallel Processing, 4641 : pp. 214-223, August, 2007.

Naga Vydyanathan, Umit V. Catalyurek, Tahsin M. Kurc, Joel H. Saltz, P. Sadayappan, "Toward Optimizing Latency under Throughput Constraints", Proceedings of Euro-Par, 4641 : pp. 173-183, August, 2007.

Tahsin M. Kurc, X. Zhang, Manish Parashar, Hector Klie, Mary F. Wheeler, Umit V. Catalyurek, Joel H. Saltz, "Dynamic Data-Driven Systems Approach for Simulation Based Optimizations", Computational Science – ICCS 2007, 4487 : pp. 1213-1221, July, 2007.

Berkant Barla Cambazoglu, Olcay Sertel, Joel H. Saltz, Metin N. Gurcan, Umit V. Catalyurek, "Efficient Processing of Pathological Images Using the Grid: Computer-Aided Prognosis of Neuroblastoma", Proceedings of the 5th IEEE workshop on Challenges of large applications in distributed environments, : pp. 35-41, June, 2007.

Stephen Langella, Scott Oster, Shannon L. Hastings, Frank Siebenlist, Tahsin M. Kurc, Joel H. Saltz, "Enabling the Provisioning and Management of a Federated Grid Trust Fabric", 6th Annual PKI R&D Workshop Gaithersburg, Maryland, May, 2007.

Tony C. Pan, Metin N. Gurcan, Stephen Langella, Scott Oster, Shannon L. Hastings, Ashish Sharma, Benjamin Rutt, David W. Ervin, Tahsin M. Kurc, K.M. Siddiqui, Joel H. Saltz, Eliot Siegel, "GridCAD: Grid-based Computer-aided Detection System", RadioGraphics, 27 : pp. 889-897, May, 2007.

T. Tavares, G. Teodoro, Tahsin M. Kurc, Renato A. Ferreira, D. O. G Neto, Wagner Meira Jr., Umit V. Catalyurek, Shannon L. Hastings, Scott Oster, Stephen Langella, Joel H. Saltz, "An Efficient and Reliable Scientific Workflow System", CCGRID 2007, : pp. 445-452, May, 2007.

H Shimada, Kim L. Boyer, Joel H. Saltz, Metin N. Gurcan, "Image Analysis for Automated Assessment of Grade of Neuroblastic Differentiation", Biomedical Imaging: From Nano to Macro, 2007, : pp. 61-64, April, 2007.

H Shimada, Kim L. Boyer, Joel H. Saltz, Metin N. Gurcan, "Image analysis for automatied assessment of grade of neuroblastic differentiation", IEEE ISBI2007: International Symposium on Biomedical Imaging: From nano to macro, : pp. 61-64, April, 2007.

Bhupesh Bansal, Umit V. Catalyurek, J Chame, C Chen, E Deelman, Y Gil, Mary Hall, Vijay S. Kumar, Tahsin M. Kurc, K Lerman, Aiichiro Nakano, Y Nelson, Joel H. Saltz, Ashish Sharma, Priya Vashishta, "Intelligent Optimization of Parallel and Distributed Applications", 2007 IEEE International Parallel and Distributed Processing Symposium, : pp. 300, March, 2007.

S. Erdal, Umit V. Catalyurek, Joel H. Saltz, Jyoti Kamal, Metin N. Gurcan, "Flexible patient information search and retrieval framework: Pilot Implementation", PACS and Imaging Informatics, SPIE Symposium on Medical Imaging, Vol. 6516 March, 2007.

G. Buehrer, Srini Parthasarathy, S. Tatikonda, Tahsin M. Kurc, Joel H. Saltz, "Toward Terabyte Pattern Mining: an architecture-conscious solution", Proceedings of the 12th ACM SIGPLAN Symposium on Principles and Practice of Parallel Programming (PPOPP 2007), : pp. 2-12, March, 2007.

Shannon L. Hastings, Scott Oster, Stephen Langella, David W. Ervin, Tahsin M. Kurc, Joel H. Saltz, "Introduce: An Open Source Toolkit for Rapid Development of Strongly Typed Grid Services", Journal of Grid Computing, 4 (5) : pp. 407-427, March, 2007.

A. Ghoting, G. Buehrer, Matthew Goyder, S. Tatikonda, X. Zhang, Srini Parthasarathy, Tahsin M. Kurc, Joel H. Saltz, "Knowledge and Cache Conscious Algorithm Design and Systems Support for Data Mining Algorithms", 2007 IEEE International Parallel and Distributed Processing Symposium, : pp. 310, March, 2007.

Metin N. Gurcan, Tony C. Pan, Ashish Sharma, Tahsin M. Kurc, Scott Oster, Stephen Langella, Shannon L. Hastings, K.M. Siddiqui, Eliot Siegel, Joel H. Saltz, "GridImage: A Novel Use of Grid Computing to Support Interactive Human and Computer-Assisted Detection Decision Support", Journal of Digital Imaging, 20 (2) : pp. 160-171, February, 2007.

R. Sharp, R. Ridgway, P. Wenzel, Tony C. Pan, A. de Bruin, Raghu Machiraju, Kun Huang, Gustavo Leone, Joel H. Saltz, "Volume rendering phenotype differences in mouse placenta microscopy data", Computing in Science & Engineering, Vol. 9 (1) : pp. 38-47, January, 2007.

P. Wenzel, L. Wu, A. de Bruin, J. Chong, W. Chen, G. Dureska, E. Sites, Tony C. Pan, Ashish Sharma, Kun Huang, R. Ridgway, R. Sharp, Raghu Machiraju, Joel H. Saltz, H. Yamamoto, J. Cross, M. Robinson, Gustavo Leone, "Rb Is Critical in a Mammalian Tissue Stem Cell Population", Genes & Development, 21 (1) : pp. 85-97, January, 2007.

Brent Woods, Bradley Clymer, Johannes Heverhagen, Michael K. Knopp, Joel H. Saltz, Tahsin M. Kurc, "Parallel 4-D Haralick Texture Analysis for Disk-resident Image Datasets", Concurrency and Computation: Practice and Experience, 19 (1) : pp. 65-87, December, 2007.

Hector Klie, Wolfgang Bangerth, X. Gai, MF Wheeler, Paul L. Stoffa, Mrinal Sen, Manish Parashar, Umit V. Catalyurek, Joel H. Saltz, Tahsin M. Kurc, "Models, Methods and Middleware for Grid-Enabled Multiphysics Oil reservoir Management", Engineering with Computers, 22 (3) : pp. 349-370, December, 2006.

Vijay S. Kumar, Benjamin Rutt, Tahsin M. Kurc, Umit V. Catalyurek, Joel H. Saltz, Sunny Chow, Stephan Lamont, Maryann Martone, "Imaging and Visual Analysis - Large Image Correction and Warping in a Cluster Environment", Proceedings of the ACM/IEEE SC2006 Conference on High Performance Networking and Computing, : pp. 79, November, 2006.

Vijay S. Kumar, Benjamin Rutt, Tahsin M. Kurc, Umit V. Catalyurek, Sunny Chow, Stephan Lamont, Maryann Martone, Joel H. Saltz, "Large Image Correction and Warping in a Cluster Environment", Proceedings of the 2006 ACM/IEEE conference on Supercomputing (SC2006), : pp. 38-38, November, 2006.

G. Teodoro, T. Tavares, Renato A. Ferreira, Tahsin M. Kurc, W. Meira Jr., D. Guedes, Tony C. Pan, Joel H. Saltz, "A Run-time System for Efficient Execution of Scientific Workflows on Distributed Environments", Computer Architecture and High Performance Computing, 2006. SBAC-PAD, : pp. 81-90, October, 2006.

Naga Vydyanathan, S. Krishnamoorthy, G. Sabin, Umit V. Catalyurek, Tahsin M. Kurc, P. Sadayappan, Joel H. Saltz, "Locality Conscious Processor Allocation and Scheduling for Mixed Parallel Applications", Proceedings of 2006 IEEE International Conference on Cluster Computing, : pp. 1-10, September, 2006.

Metin N. Gurcan, Tony C. Pan, H Shimada, Joel H. Saltz, "Image analysis for neuroblastoma classification: Segmentation of Cell Nuclei", Engineering in Medicine and Biology Society, : pp. 4844-4847, September, 2006.

Xi Zhang, Benjamin Rutt, Umit V. Catalyurek, Tahsin M. Kurc, Paul L. Stoffa, Mrinal Sen, Joel H. Saltz, "Supporting Scalable and Distributed Data Subsetting and Aggregation in Large-Scale Seismic Data Analysis", The International Journal of High Performance Computing Applications, 20 (3) : pp. 423-438, August, 2006.

Sivaramakrishnan Narayanan, Tahsin M. Kurc, Umit V. Catalyurek, Joel H. Saltz, "On Creating Efficient Object-relational Views of Scientific Datasets", Proceedings of the 2006 International Conference on Parallel Processing (ICPP-06), : pp. 551-558, August, 2006.

Naga Vydyanathan, S. Krishnamoorthy, G. Sabin, Umit V. Catalyurek, Tahsin M. Kurc, P. Sadayappan, Joel H. Saltz, "An Integrated Approach for Processor Allocation and Scheduling of Mixed-Parallel Applications", Proceedings of the 2006 International Conference on Parallel Processing (ICPP-06), : pp. 443-450, August, 2006.

Li Weng, Umit V. Catalyurek, Tahsin M. Kurc, Gagan Agrawal, Joel H. Saltz, "Using Space and Attribute Partitioned Partial Replicas for Data Subsetting and Aggregation Queries", Proceedings of the 2006 International Conference on Parallel Processing (ICPP-06), : pp. 271-280, August, 2006.

R. Sharp, R. Ridgway, O. Irfanoglu, P. Wenzel, Raghu Machiraju, A. de Bruin, Gustavo Leone, Kun Huang, Joel H. Saltz, "Examining Phenotype Differences in Mouse Placenta with Volume Rendering and Segmentation", Life Science Systems and Applications Workshop, 2006. IEEE/NLM, : pp. 1-2, July, 2006.

Gaurav Khanna, Umit V. Catalyurek, Tahsin M. Kurc, P. Sadayappan, Joel H. Saltz, "A Data Locality Aware Online Scheduling Approach for I/O-Intensive Jobs with File Sharing", Proceedings of the 12th International Workshop on Job Scheduling Strategies for Parallel Processing (JSSPP 2006), June, 2006.

Gaurav Khanna, Naga Vydyanathan, Umit V. Catalyurek, Tahsin M. Kurc, S. Krishnamoorthy, P. Sadayappan, Joel H. Saltz, "Task Scheduling and File Replication for Data-Intensive Jobs with Batch-shared I/O", Proceedings of the 15th IEEE International Symposium on High-Performance Distributed Computing (HPDC-15), : pp. 241-252, June, 2006.

Stephen Langella, Scott Oster, Shannon L. Hastings, Frank Siebenlist, Tahsin M. Kurc, Joel H. Saltz, "Dorian: Grid Service Infrastructure for Identity Management and Federation", The 19th IEEE Symposium on Computer-Based Medical Systems, : pp. 756-761, June, 2006.

PFU Gotardo, Kim L. Boyer, Joel H. Saltz, Subha Raman, "A New Deformable Model for Boundary Tracking in Cardiac MRI and Its Application to the Detection of Intra-Ventricular Dyssynchrony", 2006 IEEE Computer Society Conference on Computer Vision and Pattern Recognition., 1 : pp. 736-743, June, 2006.

Joel H. Saltz, Scott Oster, Shannon L. Hastings, Stephen Langella, William Sanchez, Manav Kher, Peter A. Covitz, Tahsin M. Kurc, Krishnakant Shanbhag, "caGrid: design and implementation of the core architecture of the cancer biomedical informatics grid", Bioinformatics, 22 (15) : pp. 1910-1916, June, 2006.

Manish Parashar, Vincent Matossian, Hector Klie, Sunil G. Thomas, Mary F. Wheeler, Tahsin M. Kurc, Joel H. Saltz, "Towards Dynamic Data-Driven Management of the Ruby Gulch Waste Repository", Lecture Notes in Computer Science, 3993 : pp. 384-392, May, 2006.

Naga Vydyanathan, Gaurav Khanna, Umit V. Catalyurek, Tahsin M. Kurc, Joel H. Saltz, P. Sadayappan, "Scheduling of Tasks with Batch-Shared I/O on Heterogeneous Systems", Proceedings of 20th International Parallel and Distributed Processing Symposium (IPDPS), April, 2006.

Xi Zhang, Tahsin M. Kurc, Joel H. Saltz, "Design and Analysis of a Multi-dimensional Data Sampling Service for Large Scale Data Analysis Applications", 20th IEEE International Parallel & Distributed Processing Symposium (IPDPS), : pp. 58, April, 2006.

G. Buehrer, A. Ghoting, X. Zhang, S. Tatikonda, Srini Parthasarathy, Tahsin M. Kurc, Joel H. Saltz, "I/O conscious algorithm design and systems support for data analysis on emerging architectures", 20th International Parallel and Distributed Processing Symposium, 2006. IPDPS 2006., : pp. 8, April, 2006.

Kim L. Boyer, PFU Gotardo, Joel H. Saltz, Subha Raman, "On the detection of intra-ventricular dyssynchrony in the left ventricle from routine cardiac MRI", 3rd IEEE International Symposium on Biomedical Imaging: Macro to Nano, : pp. 169-172, April, 2006.

R. Sharp, R. Ridgway, S. Iyengar, Alexandra Gulacy, P. Wenzel, A. de Bruin, Raghu Machiraju, Kun Huang, Gustavo Leone, Joel H. Saltz, "Registration and 3D Visualization of Large Microscopy Images", Proceedings of the SPIE Annual Medical Imaging Meetings, 6144 : pp. 923-934, February, 2006.

Tahsin M. Kurc, Daniel A. Janies, Andrew Johnson, Stephen Langella, Scott Oster, Shannon L. Hastings, Farhat Habib, Terry Camerlengo, David W. Ervin, Umit V. Catalyurek, Joel H. Saltz, "An XML-based System for Synthesis of Data from Disparate Databases", Journal of the American Medical Informatics Association, 13 : pp. 289-301, January, 2006.

G. Jia, Johannes Heverhagen, Raghu Machiraju, Joel H. Saltz, Michael K. Knopp, "Preventing signal degradation during elastic matching of noisy DCE-MRI eye images", Lecture Notes in Computer Science, 4190 : pp. 832-839, January, 2006.

Shannon L. Hastings, Matheus F. Ribeiro, Stephen Langella, Scott Oster, Umit V. Catalyurek, Tony C. Pan, Kun Huang, Renato A. Ferreira, Joel H. Saltz, Tahsin M. Kurc, "XML Database Support for Distributed Execution of Data-Intensive Scientific Workflows", SIGMOD Record, 34 (3) : pp. 50-55, December, 2005.

Matheus F. Ribeiro, Tahsin M. Kurc, Tony C. Pan, Kun Huang, Umit V. Catalyurek, Xi Zhang, Stephen Langella, Shannon L. Hastings, Scott Oster, Renato A. Ferreira, Joel H. Saltz, "Tools For Efficient Subsetting and Pipelined Processing of Large Scale, Distributed Biomedical Image Data", December, 2005.

Benjamin Rutt, Vijay S. Kumar, Tony C. Pan, Tahsin M. Kurc, Umit V. Catalyurek, Joel H. Saltz, "Distributed Out-of-Core Preprocessing of Very Large Microscopy Images for Efficient Querying", IEEE Cluster 2005 Conference, : pp. 1-10, December, 2005.

Sivaramakrishnan Narayanan, Tahsin M. Kurc, Umit V. Catalyurek, Joel H. Saltz, "Servicing Seismic and Oil Reservoir Simulation Data Through Grid Data Services", Book Series: Data Management in Grids; Lecture Notes in Computer Science, 3836 : pp. 129-142, December, 2005.

Manuel Ujaldon, Joel H. Saltz, "The GPU on irregular computing: Performance issues and contributions", Proceedings of the Ninth International Conference on Computer Aided Design and Computer Graphics (CAD/CG), : pp. 7, December, 2005.

Manuel Ujaldon, Joel H. Saltz, "Exploiting parallelism on irregular applications using the GPU", Proceedings of the 2005 International Parallel Computing Conference (PARCO'05), September, 2005.

Sivaramakrishnan Narayanan, Tahsin M. Kurc, Umit V. Catalyurek, Joel H. Saltz, "Servicing Seismic and Oil Reservoir Simulation Data", September, 2005.

Tahsin M. Kurc, Umit V. Catalyurek, Xi Zhang, Joel H. Saltz, R. Martino, Mary F. Wheeler, Malgorzata Peszynska, Alan Sussman, C. Hansen, Mrinal Sen, Roustam Seifoullaev, Paul L. Stoffa, Carlos Torres-Verdin, Manish Parashar, "A Simulation and Data Analysis System for Large Scale, Data-Driven Oil Reservoir Simulation Studies", Concurrency and Computation: Practice and Experience, 17 (11) : pp. 1441-1467, September, 2005.

Manuel Ujaldon, Joel H. Saltz, "The GPU as an indirection engine for a fast information retrieval", International Journal of Electronic Business, 3 (3/4) : pp. 316-327, July, 2005.

L. Weng, Umit V. Catalyurek, Tahsin M. Kurc, Gagan Agrawal, Joel H. Saltz, "Servicing Range Queries on Multidimensional Datasets with Partial Replicas", Proceedings of Cluster Computing and Grid 2005 (CCGrid05), : pp. 726-733, June, 2005.

H. Wang, Srini Parthasarathy, A. Ghoting, S. Tatikonda, G. Buehrer, Tahsin M. Kurc, Joel H. Saltz, "Design of a Next-generation Sampling Service for Large Scale Data Analysis Applications", 19th ACM International Conference on Supercomputing (ICS, : pp. 91-100, June, 2005.

Gaurav Khanna, Naga Vydyanathan, Tahsin M. Kurc, Umit V. Catalyurek, Pete Wyckoff, Joel H. Saltz, P. Sadayappan, "A Hypergraph Partitioning Based Approach for Scheduling of Tasks with Batch-Shared I/O", Cluster Computing and Grid 2005, 2 : pp. 792-799, May, 2005.

Ming Jin, Garry Drwal, Tran Bourgeois, Joel H. Saltz, Haifeng M. Wu, "Distinct proteome features of plasma microparticles", Proteomics, 5 : pp. 1940-1952, May, 2005.

Manish Parashar, Vincent Matossian, Wolfgang Bangerth, Hector Klie, Benjamin Rutt, Tahsin M. Kurc, Umit V. Catalyurek, Joel H. Saltz, Mary F. Wheeler, "Towards Dynamic Data-Driven Optimization of Oil Well Placement", Lecture Notes in Computer Science, 3515 : pp. 656-663, April, 2005.

Shannon L. Hastings, Stephen Langella, Scott Oster, Tahsin M. Kurc, Tony C. Pan, Umit V. Catalyurek, Daniel A. Janies, Joel H. Saltz, "Grid-based Management of Biomedical Data using an XML-based Distributed Data Management System", Proceedings of the 19th Annual ACM Symposium on Applied Computing (SAC '05), : pp. 105-109, March, 2005.

Shannon L. Hastings, Scott Oster, Stephen Langella, Tahsin M. Kurc, Tony C. Pan, Umit V. Catalyurek, Joel H. Saltz, "A Grid-Based Image Archival and Analysis System", Journal of the American Informatics Association (JAMIA), : pp. 286-295, March, 2005.

Vijay S. Kumar, Tahsin M. Kurc, Umit V. Catalyurek, Joel H. Saltz, "Design and Implementation of a Data Server Using a Peer-to-Peer Storage System", Proceedings of the 2005 Spring Simulation Multiconference, March, 2005.

Sivaramakrishnan Narayanan, Umit V. Catalyurek, Tahsin M. Kurc, Vijay S. Kumar, Joel H. Saltz, "A Runtime Framework for Partial Replication and Its Application for On-Demand Data Exploration", Proceedings of the 2005 Spring Simulation Multiconference, March, 2005.

Stephen Langella, Shannon L. Hastings, Scott Oster, Tahsin M. Kurc, Umit V. Catalyurek, Joel H. Saltz, "A Distributed Data Management Middleware for Data-Driven Application Systems", Proceedings of the 2004 IEEE International Conference on Cluster Computing, : pp. 267-276, February, 2005.

Tony C. Pan, Daniel Cowden, Umit V. Catalyurek, Scott Jewell, Shannon L. Hastings, Scott Oster, Stephen Langella, Tahsin M. Kurc, Joel H. Saltz, "Virtual Microscopy: Distributed Image Storage, Retrieval, Analysis, and Visualization", Parallel Computing in Bioinformatics, John Wiley & Sons, Albert Zomaya, January, 2005.

Manish Parashar, Hector Klie, Umit V. Catalyurek, Tahsin M. Kurc, Vincent Matossian, Joel H. Saltz, Mary F. Wheeler, "Application of Grid-enabled technologies for solving optimization problems in data-driven reservoir studies", Future Generation Computer Systems, 21 (1) : pp. 19-26, January, 2005.

Brent Woods, Bradley Clymer, Joel H. Saltz, Tahsin M. Kurc, "A Parallel Implementation of 4-Dimensional Haralick Texture Analysis for Disk-Resident Image Datasets", Supercomputing, 2004. Proceedings of the ACM/IEEE SC2004 Conference, : pp. 48-48, November, 2004.

Naga Vydyanathan, Gaurav Khanna, Tahsin M. Kurc, Umit V. Catalyurek, Pete Wyckoff, Joel H. Saltz, P. Sadayappan, "Use of PVFS for Efficient Execution of Jobs with Pipeline-Shared I/O", Proceedings of the Fifth IEEE/ACM International Workshop on Grid Computing, 2004, : pp. 235-242, November, 2004.

Gagan Agrawal, L. Wang, Umit V. Catalyurek, Joel H. Saltz, "Supporting SQL-3 Aggregations on Grid-based Data Repositories", Languages and Compilers for High Performance Computing, : pp. 283-298, September, 2004.

Shannon L. Hastings, Stephen Langella, Scott Oster, Joel H. Saltz, "Distributed Data Management and Integration Framework: The Mobius Project", Proceedings of the Global Grid Forum 11 (GGF11) Semantic Grid Applications Workshop, : pp. 20-38, June, 2004.

Henrique Andrade, Tahsin M. Kurc, Alan Sussman, Joel H. Saltz, "Optimizing the Execution of Multiple Data Analysis Queries in Parallel and Distributed Environments", IEEE Transactions on Parallel and Distributed Systems, 15 (6) : pp. 520-532, June, 2004.

Manish Parashar, Hector Klie, Umit V. Catalyurek, Tahsin M. Kurc, Vincent Matossian, Joel H. Saltz, Mary F. Wheeler, "Applications of Grid-enabled Technologies for Solving Optimization Problems in Data-Driven Reservior Studies", Proceedings of the Workshop on Distributed Data Driven Applications and Systems (ICCS 2004), June, 2004.

Xi Zhang, Tahsin M. Kurc, Tony C. Pan, Umit V. Catalyurek, Sivaramakrishnan Narayanan, Pete Wyckoff, Joel H. Saltz, "Strategies for Using Additional Resources in Parallel", Proceedings of 13th IEEE International Symposium on High Performance Distributed Computing, 2004, (HPDC-13), : pp. 4-13, June, 2004.

L. Weng, Gagan Agrawal, Umit V. Catalyurek, Tahsin M. Kurc, Sivaramakrishnan Narayanan, Joel H. Saltz, "An Approach for Automatic Data Virtualization", Proceedings of the 13th IEEE International Symposium on High-Performance Distributed Computing (HPDC-13), : pp. 24-33, June, 2004.

Xi Zhang, Tony C. Pan, Umit V. Catalyurek, Tahsin M. Kurc, Joel H. Saltz, "Serving queries to multi-resolution datasets on disk-based storage clusters", Proceedings of the 4th IEEE International Symposium on Cluster Computing and the Grid, 2004 (CCGrid 2004), : pp. 490-498, April, 2004.

Umit V. Catalyurek, Michael Beynon, Chialin Chang, Tahsin M. Kurc, Alan Sussman, Joel H. Saltz, "The Virtual Microscope", IEEE Transactions on Information Technology in Biomedicine, Vol. 7 (4) : pp. 230-248, December, 2003.

Sivaramakrishnan Narayanan, Umit V. Catalyurek, Tahsin M. Kurc, Xi Zhang, Joel H. Saltz, "Applying Database Support for Large Scale Data Driven Science in Distributed Environments", Proceedings of the Fourth International Workshop on Grid Computing (Grid 2003), : pp. 141-148, November, 2003.

Dave Berry, Cécile Gemain-Renaud, Derek Hill, Steve Pieper, Joel H. Saltz, "IMAGE 03: Images, Medical Analysis, and Grid Environments", e-Science Center Technical Paper UK-eS-2004-02, September, 2003.

Radhakrishnan Sundaresan, Mario Lauria, Tahsin M. Kurc, Srini Parthasarathy, Joel H. Saltz, "Adaptive Polling of Grid Resource Monitors Using a Slacker Coherence Model", Proceedings of the 12th IEEE International Symposium on High Performance Distributed Computing (HPDC'03), : pp. 260-269, June, 2003.

Joel H. Saltz, Umit V. Catalyurek, Tahsin M. Kurc, Michael Gray, Shannon L. Hastings, Stephen Langella, Sivaramakrishnan Narayanan, R. Martino, Kelvin Bryant, Malgorzata Peszynska, Mary F. Wheeler, Alan Sussman, Michael Beynon, C. Hansen, Donald Stredney, Dennis Sessana, "Driving Scientific Applications by Data in Distributed Environments", Proceedings of the Workshop on Dynamic Data-Driven Application Systems (ICCS 2003), June, 2003.

Pavan Balaji, Jiesheng Wu, Tahsin M. Kurc, Umit V. Catalyurek, Dhabaleswar K. Panda, Joel H. Saltz, "Impact of High Performance Sockets on Data Intensive Applications", Proceedings of the 12th IEEE International Symposium on High Performance Distributed Computing (HPDC, : pp. 24-33, June, 2003.

Shannon L. Hastings, Lone Aagesen, Lone Aagesen, Muhammad Ali, Muhammad Ali, Tahsin M. Kurc, Stephen Langella, Umit V. Catalyurek, Tony C. Pan, Joel H. Saltz, "Image Processing for the Grid: A Toolkit for Building Grid-enabled Image Processing Applications", Proceedings of the 3rd International Symposium on Cluster Computing and the Grid, : pp. 36-43, May, 2003.

Umit V. Catalyurek, Michael Gray, Tahsin M. Kurc, Joel H. Saltz, Eric A. Stahlberg, Renato A. Ferreira, "A Component-based Implementation of Multiple Sequence Alignment", Proceedings of the 2003 ACM Symposium on Applied Computing, SAC2003, : pp. 122-126, March, 2003.

Yuan-Shin Hwang, Joel H. Saltz, "Identifying Parallelism in Programs with Cyclic Graphs", Journal of Parallel and Distributed Computing, 63 (3) : pp. 337-355, March, 2003.

Yuan-Shin Hwang, Joel H. Saltz, "Interprocedural Definition-Use Chains of Dynamic Pointer-Linked Data Structures", Scientific Programming, 11 (1) : pp. 3-37, March, 2003.

Sivaramakrishnan Narayanan, Tahsin M. Kurc, Umit V. Catalyurek, Joel H. Saltz, "Database Support for Data-Driven Scientific Applications in the Grid", Parallel Processing Letters, 13 (2) : pp. 245-271, January, 2003.

Mary F. Wheeler, Malgorzata Peszynska, C. Dawson, D. Arnold, Tahsin M. Kurc, Manish Parashar, Joel H. Saltz, "Parallel Computing in Environment and Energy", Sourcebook of Parallel Computing, : pp. 145-165, November, 2002.

Matthew Spencer, Renato A. Ferreira, Michael Beynon, Tahsin M. Kurc, Umit V. Catalyurek, Alan Sussman, Joel H. Saltz, "Executing Multiple Pipelined Data Analysis Operations in the Grid", Proceedings of the 2002 ACM/IEEE SC02 Conference, : pp. 1-18, November, 2002.

Henrique Andrade, Tahsin M. Kurc, Alan Sussman, Joel H. Saltz, "Exploiting Functional Decomposition for Efficient Parallel Processing of Multiple Data Analysis Queries", Proceedings of International Parallel and Distributed Processing Symposium (IPDPS 2003), : pp. 10, October, 2002.

Michael Beynon, Henrique Andrade, Joel H. Saltz, "Low-Cost Non-Intrusive Debugging Strategies for Distributed Parallel Programs", Proceedings of the 4th IEEE International Conference on Cluster Computing, : pp. 439-442, September, 2002.

Henrique Andrade, Tahsin M. Kurc, Alan Sussman, Eugene Borovikov, Joel H. Saltz, "On Cache Replacement Policies for Servicing Mixed Data Intensive Query Workloads", Proceedings of the Second Workshop on Caching, Coherence and Consistency (WC3-02), June, 2002.

Renato A. Ferreira, Gagan Agrawal, Joel H. Saltz, "Compiler Supported High-level Abstractions for Sparse Disk-Resident Datasets", Proceedings of the 16th international ACM conference on Supercomputing, ICS '02, : pp. 241-251, June, 2002.

Henrique Andrade, Tahsin M. Kurc, Alan Sussman, Joel H. Saltz, "Active Proxy-G: Optimizing the Query Execution Process in the Grid", Proceedings of the 2002 ACM/IEEE conference on Supercomputing (SC2002), : pp. 57-57, May, 2002.

Michael Beynon, Chialin Chang, Umit V. Catalyurek, Tahsin M. Kurc, Alan Sussman, Henrique Andrade, Renato A. Ferreira, Joel H. Saltz, "Processing Large-Scale Multidimensional Data in Parallel and Distributed Environments", Parallel Computing (special issue on parallel data-intensive algorithms and applications), 28 (5) : pp. 827-859, May, 2002.

Henrique Andrade, Tahsin M. Kurc, Joel H. Saltz, Alan Sussman, "Multiple Query Optimization for Data Analysis Applications on Clusters of SMPs", Proceedings of the IEEE International Symposium on Cluster Computing and the Grid (CCGrid2002), : pp. 154, May, 2002.

Renato A. Ferreira, Gagan Agrawal, Joel H. Saltz, "Data parallel language and compiler support for data intensive applications", Parallel Computing, 28 (5) : pp. 725-748, May, 2002.

Michael Beynon, Tahsin M. Kurc, Umit V. Catalyurek, Alan Sussman, Joel H. Saltz, "Efficient Manipulation of Large Datasets on Heterogeneous Storage Systems", Proceedings of 16th International Parallel and Distributed Processing Symposium (IPDPS), The 11th Heterogeneous Computing Workshop (HCW 2002), : pp. 0084, April, 2002.

Umit V. Catalyurek, Eric A. Stahlberg, Renato A. Ferreira, Joel H. Saltz, "Improving Performance of Multiple Sequence Alignment Analysis in Multi-client Environments", Proceedings of the First International Workshop on High Performance Computational Biology (HiCOMB 2002, IPDPS 2002), : pp. 0183b, April, 2002.

Michael Beynon, Tahsin M. Kurc, Alan Sussman, Joel H. Saltz, "Optimizing Execution of Component-based Applications Using Group Instances", Future Generation Computing Systems, 18 (4) : pp. 435-448, April, 2002.

Henrique Andrade, Tahsin M. Kurc, Umit V. Catalyurek, Alan Sussman, Joel H. Saltz, "Persistent Caching in a Multiple Query Optimization Framework", Proceedings of the Sixth Workshop on Languages, Compilers and Run-time Systems for Scalable Computers, March, 2002.

Henrique Andrade, Tahsin M. Kurc, Alan Sussman, Joel H. Saltz, "Scheduling Multiple Data Visualization Query Workloads on a Shared Memory Machine", Proceedings of the Fifth Merged IPPS/SPDP (International Parallel Processing Symposium & Symposium on Parallel and Distributed Processing), : pp. 11-18, March, 2002.

Henrique Andrade, Tahsin M. Kurc, Alan Sussman, Eugene Borovikov, Joel H. Saltz, "Servicing Mixed Data Intensive Query Workloads", February, 2002.

Michael Beynon, Tahsin M. Kurc, Umit V. Catalyurek, Chialin Chang, Alan Sussman, Joel H. Saltz, "Distributed Processing of Very Large Datasets with DataCutter", Parallel Computing, 27 (11) : pp. 1457-1478, October, 2001.

Michael Beynon, Alan Sussman, Umit V. Catalyurek, Tahsin M. Kurc, Joel H. Saltz, "Performance Optimization for Data Intensive Grid Applications", Proceedings of the Third Annual International Workshop on Active Middleware Services (AMS2001), : pp. 97-105, September, 2001.

Renato A. Ferreira, Joel H. Saltz, Gagan Agrawal, "Compiler and Runtime Analysis for Efficient Communication in Data Intensive Applications", Proceedings of International Conference on Parallel Architectures and Compilation Techniques (PACT`2001), : pp. 0231, September, 2001.

Tahsin M. Kurc, Tahsin M. Kurc, Umit V. Catalyurek, Umit V. Catalyurek, Chialin Chang, Chialin Chang, Joel H. Saltz, Alan Sussman, Joel H. Saltz, "Visualization of Large Datasets with the Active Data Repository", IEEE Computer Graphics and Applications, Vol. 21 (4) : pp. 24-33, July, 2001.

Tahsin M. Kurc, Umit V. Catalyurek, Chialin Chang, Alan Sussman, Joel H. Saltz, "Exploration and Visualization of Very Large Datasets with the Active Data Repository", IEEE Computer Graphics & Applications, Vol. 21 (4) : pp. 24-33, July, 2001.

Tahsin M. Kurc, Tahsin M. Kurc, Umit V. Catalyurek, Umit V. Catalyurek, Chialin Chang, Chialin Chang, Joel H. Saltz, Alan Sussman, Joel H. Saltz, "Visualization of Large Datasets with the Active Data Repository", IEEE Computer Graphics and Applications, Vol. 21 (4) : pp. 24-33, July, 2001.

Tahsin M. Kurc, Henrique Andrade, Joel H. Saltz, Tahsin M. Kurc, Alan Sussman, Joel H. Saltz, "Efficient Execution of Multiple Query Workloads in Data Analysis Applications", Proceedings of the 2001 ACM/IEEE conference on Supercomputing (SC2001), : pp. 53, May, 2001.

Tahsin M. Kurc, Henrique Andrade, Joel H. Saltz, Tahsin M. Kurc, Alan Sussman, Joel H. Saltz, "Efficient Execution of Multiple Query Workloads in Data Analysis Applications", Proceedings of the 2001 ACM/IEEE conference on Supercomputing (SC2001), : pp. 53, May, 2001.

Chialin Chang, Tahsin M. Kurc, Alan Sussman, Umit V. Catalyurek, Joel H. Saltz, "A Hypergraph-Based Workload Partitioning Strategy for Parallel Data Aggregation", Proceedings of the Tenth SIAM Conference on Parallel Processing for Scientific Computing, March, 2001.

Joel H. Saltz, Bongki Moon, H.V. Jagadish, H.V. Jagadish, Christos Faloutsos, Christos Faloutsos, Bongki Moon, Joel H. Saltz, "Analysis of the Clustering Properties of the Hilbert Space-filling Curve", IEEE Transactions on Knowledge and Data Engineering, 13 (1) : pp. 124-141, February, 2001.

Joel H. Saltz, Bongki Moon, H.V. Jagadish, H.V. Jagadish, Christos Faloutsos, Christos Faloutsos, Bongki Moon, Joel H. Saltz, "Analysis of the Clustering Properties of the Hilbert Space-filling Curve", IEEE Transactions on Knowledge and Data Engineering, 13 (1) : pp. 124-141, February, 2001.

Gagan Agrawal, Renato A. Ferreira, Joel H. Saltz, "Language Extensions and Compilation Techniques for Data Intensive Computations", Proceedings of CPC2000. Workshop on Compilers for Parallel Computers, December, 2000.

Henrique Andrade, Tahsin M. Kurc, Alan Sussman, Joel H. Saltz, "Decision Tree Construction for Data Mining on Clusters of Shared-Memory Multiprocessors", December, 2000.

Renato A. Ferreira, Gagan Agrawal, Joel H. Saltz, "Advanced Compiler and Runtime Support for Data Intensive Applications", Proceedings of SBAC-PAD 2000, 12th Symposium on Computer Architecture & High Performance Computing, Sao Pedro, Brazil, December, 2000.

Henrique Andrade, Joel H. Saltz, "Query Optimization in Kess - An Ontology-Based KBMS", Proceedings of the 15th Brazilian Symposium on Databases, October, 2000.

Tahsin M. Kurc, Mustafa Uysal, Hyseonsang Eom, Jeff Hollingsworth, Joel H. Saltz, Alan Sussman, "Efficient Performance Prediction for Large-Scale Data-Intensive Applications", The International Journal of High Performance Computing Applications, : pp. 216-227, September, 2000.

Renato A. Ferreira, Gagan Agrawal, Ruoming Jin, Joel H. Saltz, "Compiling Data Intensive Applications with Spatial Coordinates", Proceedings of the 13th Workshop on Languages and Compilers for Parallel Computing, : pp. 339-345, August, 2000.

Joel H. Saltz, "Digital Pathology--The Big Picture", Human Pathology, 31 (7) : pp. 779-780, July, 2000.

Merwyn Taylor, Joel H. Saltz, James H. Nichols, "Design of an Integrated Clinical Data Warehouse", Journal of the Association for Laboratory Automation (JALA), 5 (3) : pp. 54-59, July, 2000.

Merwyn Taylor, James H. Nichols, Joel H. Saltz, "POCT connectivity: Opening the door to a laboratory without walls", American Clinical Laboratory, 7 : pp. 12-13, July, 2000.

Gagan Agrawal, Renato A. Ferreira, Joel H. Saltz, Ruoming Jin, "High Level Programming Methodologies for Data Intensive Applications", Proceedings of the Fifth Workshop on Languages, Compilers and Run-time Systems for Scalable Computers, May, 2000.

Tahsin M. Kurc, Michael Beynon, Alan Sussman, Joel H. Saltz, "DataCutter and A Client Interface for the Storage Resource Broker with DataCutter Services", May, 2000.

Michael Beynon, Tahsin M. Kurc, Alan Sussman, Joel H. Saltz, "Design of a Framework for Data-Intensive Wide-Area Applications", Proceedings of the 9th Heterogeneous Computing Workshop (HCW2000), : pp. 116-130, May, 2000.

Renato A. Ferreira, Gagan Agrawal, Joel H. Saltz, "Compiling Object-Oriented Data Intensive Applications", Proceedings of the 2000 International Conference on Supercomputing (ICS '02), : pp. 11-21, May, 2000.

Chialin Chang, Tahsin M. Kurc, Alan Sussman, Joel H. Saltz, "Optimizing Retrieval and Processing of Multi-dimensional Scientific Datasets", 14th International Parallel and Distributed Processing Symposium (IPDPS'00), : pp. 405, May, 2000.

Michael Beynon, Michael Beynon, Alan Sussman, Tahsin M. Kurc, Tahsin M. Kurc, Alan Sussman, Joel H. Saltz, Joel H. Saltz, "Optimizing Execution of Component-based Applications using Group Instances", Proceedings of the IEEE International Symposium on Cluster Computing and the Grid (CCGrid2001), : pp. 56-63, May, 2000.

Michael Beynon, Michael Beynon, Alan Sussman, Tahsin M. Kurc, Tahsin M. Kurc, Alan Sussman, Joel H. Saltz, Joel H. Saltz, "Optimizing Execution of Component-based Applications using Group Instances", Proceedings of the IEEE International Symposium on Cluster Computing and the Grid (CCGrid2001), : pp. 56-63, May, 2000.

Michael Beynon, Renato A. Ferreira, Tahsin M. Kurc, Alan Sussman, Joel H. Saltz, "DataCutter: Middleware for Filtering Very Large Scientific Datasets on Archival Storage Systems", Eighth NASA Goddard Conference on Mass Storage Systems and Technologies/Seventeenth IEEE Symposium on Mass Storage Systems, : pp. 119-133, March, 2000.

Mustafa Uysal, Anurag Acharya, Joel H. Saltz, "Evaluation of Active Disks for Decision Support Databases", Proceedings of the 6th International Symposium on High-Performance Computer Architecture, : pp. 337-348, January, 2000.

Joel H. Saltz, Renato A. Ferreira, Gagan Agrawal, "Extensions and Compilation Techniques for Data Intensive Computations", Proceedings of Workshop on Compilers for Parallel Computers, January, 2000.

Tahsin M. Kurc, Chialin Chang, Renato A. Ferreira, Alan Sussman, Joel H. Saltz, "Querying Very Large Multi-dimensional Datasets in ADR", Proceedings of the 1999 ACM/IEEE SC99 Conference, November, 1999.

Henrique Andrade, Joel H. Saltz, "Towards a Knowledge Base Management System (KBMS): An Ontology-Aware Database Management System (DBMS", Proceedings of the 14th Brazilian Symposium on Databases, October, 1999.

Ramaswamy Anbazhagan, Tarik Tihan, Daniel M. Bornman, Joel H. Saltz, James C. Johnston, Anthony Weigering, Steven Piantadosi, Edward Gabrielson, "Classification of Small Cell Lung Cancer and Pulmonary Carcinoid by Gene Expression Profiles", Cancer Research, 59 : pp. 5119-5122, October, 1999.

Michael Beynon, Alan Sussman, Joel H. Saltz, "Performance Impact of Proxies in Data Intensive Client-Server Applications", Proceedings of the 13th International Conference on Supercomputing, : pp. 383 - 390, June, 1999.

Renato A. Ferreira, Alan Sussman, Joel H. Saltz, "Database Methods for Efficient Manipulation of Very Large Datasets", Proceedings of the 1999 International Conference on Parallel and Distributed Processing Techniques and Applications (PDPTA`99), June, 1999.

Renato A. Ferreira, Tahsin M. Kurc, Michael Beynon, Chialin Chang, Alan Sussman, Joel H. Saltz, "Object-Relational Queries into Multi-dimensional Databases with the Active Data Repository", Parallel Processing Letters, 9 (2) : pp. 173-199, June, 1999.

Chialin Chang, Renato A. Ferreira, Alan Sussman, Joel H. Saltz, "Infrastructure for Building Parallel Database Systems for Multi-dimensional Data", Proceedings of the IEEE Second Merged IPPS/SPDP Symposiums, : pp. 582-588, April, 1999.

Tahsin M. Kurc, Alan Sussman, Joel H. Saltz, "Coupling Multiple Simulations via a High Performance Customizable Database System", Proceedings of the Ninth SIAM Conference on Parallel Processing for Scientific Computing, March, 1999.

Chialin Chang, Tahsin M. Kurc, Alan Sussman, Joel H. Saltz, "Query Planning for Range Queries with User-defined Aggregation on Multi-dimensional Scientific Datasets", February, 1999.

Anurag Acharya, Joel H. Saltz, Mustafa Uysal, "Structure and Performance of Decision Support Algorithms on Active Disks", November, 1998.

Kilian Stoffel, Larry Davis, Jerry Rottman, Joel H. Saltz, Jim Dick, William Merz, Robert Miller, "A Graphical Tool for Ad Hoc Query Generation", Proceedings of the 1998 AMIA Annual Fall Symposium, : pp. 503-507, November, 1998.

Asmara Afework, Michael Beynon, Fabian Bustamante, Seungho Cho, Angelo Demarzo, Renato A. Ferreira, Robert Miller, Mark Silberman, Joel H. Saltz, Alan Sussman, Hubert Tsang, "Digital Dynamic Telepathology - the Virtual Microscope", Proceedings of the 1998 AMIA Annual Fall Symposium, : pp. 912-916, November, 1998.

Mustafa Uysal, Anurag Acharya, Joel H. Saltz, "An Evaluation of Architectural Alternatives for Rapidly Growing Datasets: Active Disks, Clusters, SMPs", November, 1998.

Anurag Acharya, Mustafa Uysal, Joel H. Saltz, "Active Disks: Programming Model, Algorithms and Evaluation", Proceedings of the Eighth International Conference on Architectural Support for Programming Languages and Operating Systems (ASPLOS VIII), : pp. 81-91, October, 1998.

Mustafa Uysal, Tahsin M. Kurc, Alan Sussman, Joel H. Saltz, "A Performance Prediction Framework for Data Intensive Applications on Large Scale Parallel Machines", 1511 : pp. 243-258, July, 1998.

Merwyn Taylor, Kilian Stoffel, Jim Hendler, Joel H. Saltz, "Using Distributed Query Result Caching to Evaluate Queries for Parallel Data Mining Algorithms", Proceedings of PDPTA`98, July, 1998.

M. Ranganathan, Anurag Acharya, Laurent Andrey, Virginia Schaal, Joel H. Saltz, "Mobile Streams", June, 1998.

Bongki Moon, Joel H. Saltz, "Scalability Analysis of Declustering Methods for Multidimensional Range Queries", IEEE Transactions on Knowledge and Data Engineering, 10 (2) : pp. 310-327, March, 1998.

Chialin Chang, Anurag Acharya, Alan Sussman, Joel H. Saltz, "T2: A Customizable Parallel Database for Multi-dimensional Data", ACM SIGMOD Record, 27 (1) : pp. 58-66, January, 1998.

Anurag Acharya, Joel H. Saltz, "Dynamic Linking for Mobile Programs", Mobile Object Systems: Towards the Programmable Internet, : pp. 245-262, December, 1997.

Anurag Acharya, M. Ranganathan, Joel H. Saltz, "Sumatra: A Language for Resource-aware Mobile Programs", Mobile Object Systems-Towards the Programmable Internet, : pp. 111-130, December, 1997.

Manuel Ujaldon, Shamik Sharma, Joel H. Saltz, "Page Replacement Using Marginal Loss Functions", Proceedings of the 1997 ACM/IEEE SC97 Conference, : pp. 50-50, November, 1997.

Renato A. Ferreira, Bongki Moon, Jim Humphries, Alan Sussman, Joel H. Saltz, Robert Miller, Angelo Demarzo, "The Virtual Microscope", Proceedings of the 1997 AMIA Annual Fall Symposium, : pp. 449-453, October, 1997.

Kilian Stoffel, Joel H. Saltz, Jim Hendler, Jim Dick, William Merz, Robert Miller, "Semantic Indexing for Complex Patient Grouping", Proceedings of the 1997 AMIA Annual Fall Symposium, October, 1997.

Chialin Chang, Bongki Moon, Anurag Acharya, Carter Shock, Alan Sussman, Joel H. Saltz, "Titan: A High Performance Remote-Sensing Database", Proceedings of the 1997 International Conference on Data Engineering, : pp. 375-384, August, 1997.

Anurag Acharya, Guy Edjlali, Joel H. Saltz, "The Utility of Exploiting Idle Workstations for Parallel Computation", Proceedings of 1997 {ACM} Sigmetrics International Conference on Measurement and Modeling of Computer Systems, : pp. 225-236, June, 1997.

Mustafa Uysal, Anurag Acharya, Joel H. Saltz, "Requirements of I/O Systems for Parallel Machines: An Application-driven Study", May, 1997.

Mustafa Uysal, Anurag Acharya, Robert Bennett, Joel H. Saltz, "A Customizable Simulator for Workstation Networks", Proceedings of the Eleventh International Parallel Processing Symposium, : pp. 249-254, April, 1997.

Guy Edjlali, Alan Sussman, Joel H. Saltz, "Interoperability of Data Parallel Runtime Libraries", Proceedings of the Eleventh International Parallel Processing Symposium, : pp. 451-459, April, 1997.

Anurag Acharya, Joel H. Saltz, "A Study of Internet Round-Trip Delay", December, 1996.

Manuel Ujaldon, Emilio Zapata, Shamik Sharma, Joel H. Saltz, "Parallelization Techniques for Sparse Matrix Applications", Journal of Parallel and Distributed Computing, 38 (2) : pp. 256-266, November, 1996.

M. Ranganathan, Anurag Acharya, Joel H. Saltz, "Distributed Resource Monitors for Mobile Objects", Proceedings of the Fifth International Workshop on Object Orientation in Operating Systems, : pp. 19-23, October, 1996.

Carter Shock, Chialin Chang, Larry Davis, Samuel Goward, Joel H. Saltz, Alan Sussman, "A High Performance Image Database System for Remotely Sensed Imagery", Proceedings of Euro-Par`96, : pp. 109-122, August, 1996.

M. Ranganathan, Anurag Acharya, Shamik Sharma, Joel H. Saltz, "Network-aware Mobile Programs", University of Maryland, Department of Computer Science and UMIACS, : pp. 91-104, June, 1996.

Gagan Agrawal, Anurag Acharya, Joel H. Saltz, "An Interprocedural Framework for Placement of Asynchronous I/O Operations", Proceedings of the 1996 International Conference on Supercomputing, : pp. 358-365, May, 1996.

Manuel Ujaldon, Shamik Sharma, Emilio Zapata, Joel H. Saltz, "Experimental Evaluation of Efficient Sparse Matrix Distributions", Proceedings of the 1996 International Conference on Supercomputing, : pp. 78-86, May, 1996.

Guy Edjlali, Alan Sussman, Joel H. Saltz, "Interoperability of Data Parallel Runtime Libraries with Meta-Chaos", University of Maryland, Department of Computer Science and UMIACS, May, 1996.

Anurag Acharya, Mustafa Uysal, Robert Bennett, Assaf Mendelson, Michael Beynon, Jeff Hollingsworth, Joel H. Saltz, Alan Sussman, "Tuning the Performance of I/O Intensive Parallel Applications", Proceedings of the Fourth Annual Workshop on I/O in Parallel and Distributed Systems (IOPADS), : pp. 15-27, May, 1996.

M. Ranganathan, Anurag Acharya, Guy Edjlali, Alan Sussman, Joel H. Saltz, "Runtime Coupling of Data-Parallel Programs", Proceedings of the 1996 International Conference on Supercomputing, : pp. 229-236, May, 1996.

Joel H. Saltz, Anurag Acharya, "Eliminating Redundant Barrier Synchronization in Rule-Based Programs", Proceedings of the 1996 International Conference on Supercomputing, : pp. 325-332, May, 1996.

Bongki Moon, Anurag Acharya, Joel H. Saltz, "Study of Scalable Declustering Algorithms for Parallel Grid Files", Proceedings of the 10th International Parallel Processing Symposium (IPPS '96), : pp. 434, April, 1996.

Yuan Hwang, Joel H. Saltz, Raja Das, Milan Hodoscek, Bernard R. Brooks, "Parallelizing Molecular Dynamics Programs for Distributed Memory Machines", IEEE Computational Science & Engineering, 2 (2) : pp. 18-29, December, 1995.

M. Ranganathan, Anurag Acharya, Guy Edjlali, Alan Sussman, Joel H. Saltz, "Runtime Coupling of Data-parallel Programs", Proceedings of the 1996 International Conference on Supercomputing, December, 1995.

Gagan Agrawal, Joel H. Saltz, "Interprocedural Compilation of Irregular Applications for Distributed Memory Machines", Proceedings of the 1995 ACM/IEEE conference on Supercomputing (SC1995), : pp. 48-48, December, 1995.

Manuel Ujaldon, Shamik Sharma, Joel H. Saltz, Emilio Zapata, "Runtime Techniques for Parallelizing Sparse Matrix Applications", Proceedings of the Parallel Algorithms for Irregularly Structured Problems, Second International Workshop, IRREGULAR '95, : pp. 43-57, September, 1995.

Guy Edjlali, Gagan Agrawal, Alan Sussman, Jim Humphries, Joel H. Saltz, "Compiler and Runtime Support for Programming in Adaptive Parallel Environments", Scientific Programming, 5 : pp. 215-227, August, 1995.

Ravi Ponnusamy, Joel H. Saltz, Alok Choudhary, Yuan Hwang, Geoffrey Fox, "Runtime Support and Compilation Methods for User-Specified Irregular Data Distributions", IEEE Transactions on Parallel and Distributed Systems, 6 (8) : pp. 815-831, August, 1995.

Gagan Agrawal, Alan Sussman, Joel H. Saltz, "An Integrated Runtime and Compile-Time Approach for Parallelizing Structured and Block Structured Applications", IEEE Transactions on Parallel and Distributed Systems, Vol. 6 (7) : pp. 747-754, July, 1995.

S. Mukherjee, Shamik Sharma, Mark Hill, Jim Larus, Anne Rogers, Joel H. Saltz, "Efficient Support for Irregular Applications on Distributed-Memory Machines", Proceedings of the Fifth ACM SIGPLAN Symposium on Principles and Practice of Parallel Programming (PPOPP), : pp. 68-79, July, 1995.

R. Nance, H. Hassan, R. Wilmoth, Bongki Moon, Joel H. Saltz, "Parallel Monte Carlo Simulation of Three-Dimensional Flow over a Flat Plate", AIAA Journal of Thermophysics and Heat Transfer, : pp. 471-477, July, 1995.

Yuan-Shin Hwang, Bongki Moon, Shamik Sharma, Ravi Ponnusamy, Raja Das, Joel H. Saltz, "Runtime and Language Support for Compiling Adaptive Irregular Programs on Distributed Memory Machines", Software - Practice and Experience (SPE), 25 (6) : pp. 597-621, June, 1995.

Joel H. Saltz, Gagan Agrawal, Raja Das, "Interprocedural Partial Redundancy Elimination and Its Application to Distributed Memory Compilation", Proceedings of the SIGPLAN `95 Conference on Programming Language Design and Implementation, : pp. 258-269, June, 1995.

Janet Wu, Raja Das, Joel H. Saltz, Harry Berryman, Seema Hiranandani, "Distributed Memory Compiler Design for Sparse Problems", IEEE Transactions on Computers, 44 (6) : pp. 737-753, June, 1995.

Guy Edjlali, Gagan Agrawal, Alan Sussman, Joel H. Saltz, "Data Parallel Programming in an Adaptive Environment", Proceedings of the Ninth International Parallel Processing Symposium, : pp. 827-832, April, 1995.

Bongki Moon, Mustafa Uysal, Joel H. Saltz, "Index Translation Schemes for Adaptive Computations on Distributed Memory Multicomputers", Proceedings of the Ninth International Parallel Processing Symposium, : pp. 812-819, April, 1995.

Chialin Chang, Alan Sussman, Joel H. Saltz, "Object-Oriented Runtime Support for Complex Distributed Data Structures", University of Maryland, Department of Computer Science and UMIACS, March, 1995.

Joel H. Saltz, Ravi Ponnusamy, Shamik Sharma, Bongki Moon, Yuan-Shin Hwang, Mustafa Uysal, Raja Das, "A Manual for the CHAOS Runtime Library", Computer Science Technical Report Series, March, 1995.

Bongki Moon, Gopal Patnaik, Robert Bennett, David Fyfe, Alan Sussman, Craig Douglas, Joel H. Saltz, K. Kailasanath, "Runtime Support and Dynamic Load Balancing Strategies for Structured Adaptive Applications", Proceedings of the Seventh SIAM Conference on Parallel Processing for Scientific Computing, : pp. 575-580, February, 1995.

Robert Bennett, Kelvin Bryant, Alan Sussman, Raja Das, Joel H. Saltz, "A Framework for Optimizing Parallel I/O", : pp. 10-20, January, 1995.

Chialin Chang, Alan Sussman, Joel H. Saltz, "Support for Distributed Dynamic Data Structures in C++", Computer Science Technical Report Series, January, 1995.

Fred Chong, Shamik Sharma, Eric Brewer, Joel H. Saltz, "Parallelization of Fine-grained Irregular DAGs", Unpublished Manuscript, December, 1994.

Robert Bennett, Kelvin Bryant, Alan Sussman, Raja Das, Joel H. Saltz, "Jovian: A Framework for Optimizing Parallel I/O", Proceedings of the 1994 Scalable Parallel Libraries Conference, : pp. 10-20, October, 1994.

Rahul Parulekar, Larry Davis, Rama Chellappa, Joel H. Saltz, Alan Sussman, John Townshend, "High Performance Computing for Land Cover Dynamics", Proceedings of the International Joint Conference on Pattern Recognition, : pp. 234-238, September, 1994.

Raja Das, Mustafa Uysal, Joel H. Saltz, Yuan Hwang, "Communication Optimizations for Irregular Scientific Computations on Distributed Memory Architectures", Journal of Parallel and Distributed Computing, 22 (3) : pp. 462-479, September, 1994.

R. Nance, R. Wilmoth, Bongki Moon, H. Hassan, Joel H. Saltz, "Parallel DSMC Solution of Three-Dimensional Flow over a Finite Flat Plate", Proceedings of the 6th AIAA/ASME Joint Thermophysics and Heat Transfer Conference, June, 1994.

Yuan-Shin Hwang, Bongki Moon, Shamik Sharma, Raja Das, Joel H. Saltz, "Runtime Support to Parallelize Adaptive Irregular Programs", Proceedings of the Workshop on Environments and Tools for Parallel Scientific Computing, : pp. 19-32, May, 1994.

Bongki Moon, Joel H. Saltz, "Adaptive Runtime Support for Direct Simulation Monte Carlo Methods on Distributed Memory Architectures", Proceedings of the Scalable High Performance Computing Conference (SHPCC-94), : pp. 176-183, May, 1994.

Shamik Sharma, Ravi Ponnusamy, Bongki Moon, Yuan Hwang, Raja Das, Joel H. Saltz, "Run-time and Compile-time Support for Adaptive Irregular Problems", Proceedings of the 1994 ACM/IEEE conference on Supercomputing, : pp. 97-106, May, 1994.

Raja Das, Dmitri Mavriplis, Joel H. Saltz, S. Gupta, Ravi Ponnusamy, "The Design and Implementation of a Parallel Unstructured Euler Solver Using Software Primitives", AIAA Journal, 3 : pp. 489-496, March, 1994.

Fred Chong, Shamik Sharma, Eric Brewer, Joel H. Saltz, "Multiprocessor Runtime Support for Fine-Grained Irregular DAGs", University of Maryland, Department of Computer Science and UMIACS, March, 1994.

Alan Sussman, Gagan Agrawal, Joel H. Saltz, "A Manual for the Multiblock PARTI Runtime Primitives", : pp. 42, December, 1993.

Reinhard von Hanxleden, Ken Kennedy, Joel H. Saltz, "Value-based Distributions in Fortran D - A Preliminary Report", Journal of Programming Languages, 1 (4) December, 1993.

Gagan Agrawal, Alan Sussman, Joel H. Saltz, "Compiler and Runtime Support for Structured and Block Structured Applications", Proceedings of the 1993 ACM/IEEE conference on Supercomputing, : pp. 578-587, November, 1993.

Ravi Ponnusamy, Joel H. Saltz, Alok Choudhary, "Runtime-Compilation Techniques for Data Partitioning and Communication Schedule Reuse", Proceedings of the 1993 ACM/IEEE conference on Supercomputing, : pp. 361-370, November, 1993.

Gagan Agrawal, Joel H. Saltz, Alan Sussman, "On Efficient Runtime Support for Multiblock and Multigrid Applications: Regular Section Analysis", October, 1993.

Raja Das, Yuan-Shin Hwang, Mustafa Uysal, Joel H. Saltz, Alan Sussman, "Applying the CHAOS/PARTI Library to Irregular Problems in Computational Chemistry and Computational Aerodynamics", Proceedings of the 1993 Scalable Parallel Libraries Conference, : pp. 45-56, October, 1993.

Raja Das, Joel H. Saltz, Richard von Hanxleden, "Slicing Analysis and Indirect Access to Distributed Arrays", Proceedings of the 6th Workshop on Languages and Compilers for Parallel Computing, : pp. 152-168, August, 1993.

Raja Das, Joel H. Saltz, "Parallelizing Molecular Dynamics Codes using the Parti Software Primitives", Proceedings of the Sixth SIAM Conference on Parallel Processing for Scientific Computing, : pp. 187-192, March, 1993.

Ravi Ponnusamy, Raja Das, Joel H. Saltz, Dmitri Mavriplis, Alok Choudhary, "The Dybbuk Runtime System", Proceedings of the 1993 IEEE COMPCON Conference, : pp. 205-212, February, 1993.

Alan Sussman, Joel H. Saltz, Raja Das, S. Gupta, Dmitri Mavriplis, Ravi Ponnusamy, "PARTI Primitives for Unstructured and Block Structured Problems", Papers presented at the Symposium on High-Performance Computing for Flight Vehicles, : pp. 73-86, December, 1992.

Reinhard von Hanxleden, Ken Kennedy, Chuck Koelbel, Raja Das, Joel H. Saltz, "Compiler Analysis for Irregular Problems in Fortran D", Lecture Notes In Computer Science, Proceedings of the 5th International Workshop on Languages and Compilers for Parallel Computing, 757 : pp. 97-111, August, 1992.

Ashish Sharma, Tony C. Pan, Berkant Barla Cambazoglu, Shannon L. Hastings, Metin N. Gurcan, Tahsin M. Kurc, Joel H. Saltz, "VirtualPACS - A Federating Gateway to Access Remote Image Data Resources over the Grid", Journal of Digital Imaging, December, 0000.

Presentations

click to hide (-)

Joel H. Saltz, "Computational biology and bioinformatics of multi?parametric imaging.InternationalInternationalI", in Proceedings of 16th Scientific Meeting and Exhibition, Toronto, Ontario, Canada, 2008

Joel H. Saltz, Herb Smaltz, "Effective IT Governance at an AMC.", in Proceedings of Group on Information Resources Professional Development Conference, San Francisco, CA, 2008

Jeffrey Prescott, Joel H. Saltz, Metin N. Gurcan, Z Donqing, J Wang, N Mayr, W Yuh, "Cancer treatment outcome prediction by assessing temporal change: Application to cervical cancer", in Proceedings of SPIE Medical Imaging Conference 2008, San Diego, California, 2008

Joel H. Saltz, Ashish Sharma, Tony C. Pan, Walter R Bosch, Joseph O Deasy, James Purdy, "Application of caGrid Middleware to Facilitate Quality Assurance for Advanced Technology Radiation Therapy Clinical Trials", in Proceedings of 2007

Stephen Langella, Scott Oster, Shannon L. Hastings, Frank Siebenlist, Joshua Phillips, David W. Ervin, Justin D. Permar, Tahsin M. Kurc, Joel H. Saltz, "The Cancer Biomedical Informatics Grid (caBIG™) Security Infrastructure", in Proceedings of 2007 AMIA Annual Symposium, Chicago, Illinois, 2007

Scott Oster, Stephen Langella, Shannon L. Hastings, David W. Ervin, Ravi Madduri, Tahsin M. Kurc, Frank Siebenlist, Peter A. Covitz, Krishnakant Shanbhag, Ian Foster, Joel H. Saltz, "caGrid 1.0: A Grid Enterprise Architecture for Cancer Research", in Proceedings of American Medical Informatics Association (AMIA) 2007 Annual Symposium, Chicago, IL, 2007

Kun Huang, Joel H. Saltz, Tony C. Pan, Jose Antonio Andrades, Jose Becerra, Antonio Ruiz, Manuel Ujaldon, "The GPU on biomedical image processing for color and phenotype analysis", in Proceedings of IEEE BIBE 2007, Boston, Massachusetts, 2007

Joel H. Saltz, "Middleware Support and Collaborative Multi Center Translational Research", in Proceedings of Invited Talk: NIH Washington Area Computer Assisted Surgical Society, NIH Campus and NLM (Bethesda, MD), 2007

Vijay S. Kumar, Tahsin M. Kurc, Umit V. Catalyurek, Metin N. Gurcan, Joel H. Saltz, "Performance vs. Accuracy Trade-offs for Large-scale Image Analysis Applications", in Proceedings of IEEE Cluster 2007: Conference on Cluster Computing, Austin, Texas, 2007

Timothy DR Hartley, Olcay Sertel, Mansoor Khan, Umit V. Catalyurek, Joel H. Saltz, Metin N. Gurcan, "Neuroblastoma Stroma Classification on the Sony Playstation 3", in Proceedings of Pittsburgh, PA, 2007

Berkant Barla Cambazoglu, Tony C. Pan, Ashish Sharma, Vijay S. Kumar, Olcay Sertel, Metin N. Gurcan, Umit V. Catalyurek, Joel H. Saltz, "A grid-enabled image processing infrastructure for large pathology images", in Proceedings of Pittsburgh, PA, 2007

Olcay Sertel, G Lozanski, Kim L. Boyer, Joel H. Saltz, Metin N. Gurcan, "Automated detection of follicular centers for follicular lymphoma grading", in Proceedings of APIII 2007, Pittsburgh, PA, 2007

Olcay Sertel, H Shimada, Kim L. Boyer, Joel H. Saltz, Metin N. Gurcan, "Computer-assisted prognosis of neuroblastoma: Grading of differentiation", in Proceedings of APIII 2007, Pittsburgh, PA, 2007

Olcay Sertel, Antonio Ruiz, Umit V. Catalyurek, Manuel Ujaldon, Joel H. Saltz, Metin N. Gurcan, "Computationally Efficient Pathologic Image Analysis: Use of GPUs for Classification of Stromal Density", in Proceedings of 12th Anatomic Pathology Informatics and Imaging Support for Translational Medicine, Pittsburgh, Pennsylvania, 2007

Olcay Sertel, G Lozanski, H Shimada, Umit V. Catalyurek, Joel H. Saltz, Metin N. Gurcan, "Texture characterization for whole-slide histopathological image analysis: Applications to neuroblastoma and follicular lymphoma", in Proceedings of APIII 2007, Pittsburgh, PA, 2007

Metin N. Gurcan, Tony C. Pan, Benjamin Rutt, Ashish Sharma, Joel H. Saltz, "gridIMAGE: A Grid computing platform for radiological and pathological image analysis", in Proceedings of SIIM 2007 Annual Meeting, Providence, Rhode Island, 2007

Scott Oster, Shannon L. Hastings, Stephen Langella, David W. Ervin, Tahsin M. Kurc, Joel H. Saltz, "caGrid 1.0 Overview (poster)", in Proceedings of caBIG Annual Meeting 2007, Washington, D.C., 2007

Shannon L. Hastings, David W. Ervin, Scott Oster, Stephen Langella, Tahsin M. Kurc, Joel H. Saltz, "Introduce: Grid Service Authoring Toolkit (poster)", in Proceedings of caBIG Annual Meeting 2007, Washington, D.C., 2007

Stephen Langella, Scott Oster, Shannon L. Hastings, David W. Ervin, Tahsin M. Kurc, Joel H. Saltz, "caGrid 1.0 Security Infrastructure (poster)", in Proceedings of caBIG Annual Meeting 2007, Washington, D.C., 2007

Joel H. Saltz, "Biomedical Informatics Research", in Proceedings of Industry Collaboration Symposium, Columbus, OH, 2006

Metin N. Gurcan, Tony C. Pan, H Shimada, Joel H. Saltz, "caGrid Imaging Testbed to Support Pathology Image Annotation and Analysis", in Proceedings of 92nd Scientific Assembly and Annual Meeting of Radiological Society of North America (RSNA), Chicago, Illinois, 2006

Joel H. Saltz, "Architecture of a Strongly Typed Grid and Lessons Learned from the Cancer Research Community", in Proceedings of CCGSC 2006, Flatrock, NC, 2006

Tony C. Pan, Ashish Sharma, Metin N. Gurcan, Kun Huang, Gustavo Leone, Joel H. Saltz, "GridCAD Microscopy: A caBIG Based System for Image Processing and Quantitative Analysis", in Proceedings of APIII, Vancouver, British Columbia, 2006

Benjamin Rutt, Tahsin M. Kurc, Umit V. Catalyurek, Joel H. Saltz, "Use of the Teragrid for Sub-surface Modeling and Oil Reservoir Management Studies", in Proceedings of Teragrid 2006, Indianapolis, IN, 2006

Joel H. Saltz, Junghee Han, "caGrid Support for ICBP Information Integration and Analysis", in Proceedings of ICBP Meeting, Nahville, TN, 2006

Naga Vydyanathan, Gaurav Khanna, Umit V. Catalyurek, Tahsin M. Kurc, P. Sadayappan, Joel H. Saltz, "Scheduling of Tasks with Batch-shared I/O on Heterogeneous Systems", in Proceedings of Heterogeneous Computing Workshop 2006, 2006

Joel H. Saltz, "Integrating With Other Grids", in Proceedings of 2006 caBIG Annual Meeting, Arlington, VA, 2006

J. Robert Beck, David Fenstermacher, Joel H. Saltz, "caBIG Strategic Plan", in Proceedings of 2006 caBIG Annual Meeting, Arlington, VA, 2006

Eliot Siegel, Joel H. Saltz, "Introduction to Imaging in the caBIG Program", in Proceedings of 2006 caBIG Annual Meeting, Arlington, VA, 2006

Joel H. Saltz, "Data Driven Challenges in Translational Biomedical Research", in Proceedings of 2006

Joel H. Saltz, "Data Driven Challenges in Science, Engineering and Medicine", in Proceedings of Georgia Tech Computational Science and Engineering Distinguished Lecture Series, Atlanta, GA, 2006

Joel H. Saltz, "The Data Driven Challenge of Translational Research", in Proceedings of MD, 2006

G. Jia, Johannes Heverhagen, Raghu Machiraju, Michael K. Knopp, Joel H. Saltz, "Preventing signal degradation during elastic matching of noisy DCE-MR eye images", in Proceedings of Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI), Copenhagen, Denmark, 2006

G. Jia, Johannes Heverhagen, Raghu Machiraju, Michael K. Knopp, Joel H. Saltz, "Exploratory Segmentation using Geometric Tessellations", in Proceedings of 10th International Conference on Vision, Modeling and Visualization, Erlangen, Germany, 2005

Benjamin Rutt, Vijay S. Kumar, Tony C. Pan, Tahsin M. Kurc, Umit V. Catalyurek, Joel H. Saltz, "Distributed Out-of-Core Preprocessing of Very Large Microscopy Images for Efficient Querying", in Proceedings of IEEE International Conference on Cluster Computing, Boston, Massachusetts, USA, 2005

Sivaramakrishnan Narayanan, Tahsin M. Kurc, Umit V. Catalyurek, Joel H. Saltz, "Servicing Seismic and Oil Reservoir Simulation Data through Grid Data Services", in Proceedings of Very Large Databases (VLDB) Workshop on Data Management in Grids, Trondheim, Norway, 2005

Joel H. Saltz, "Computational Phenotyping and High End Computing", in Proceedings of ParCo 2005, Malaga, Spain, 2005

Umit V. Catalyurek, Tahsin M. Kurc, Gagan Agrawal, Joel H. Saltz, "Servicing Range Queries on Multidimensional Datasets with Partial Replicas", in Proceedings of Cluster Computing and Grid 2005 (CCGrid'05), Cardiff, United Kingdom, 2005

Gaurav Khanna, Naga Vydyanathan, Tahsin M. Kurc, Umit V. Catalyurek, Pete Wyckoff, Joel H. Saltz, P. Sadayappan, "A Hypergraph Partitioning Based Approach for Scheduling of Tasks with Batch-Shared I/O", in Proceedings of Cluster Computing and Grid 2005 (CCGrid'05), Cardiff, United Kingdom, 2005

Scott Oster, Stephen Langella, Shannon L. Hastings, Tahsin M. Kurc, Joel H. Saltz, "XML-based Data Management Support for Biomedical Applications", in Proceedings of 2005 caBIG (cancer Biomedical Informatics Grid) Annual Meeting, Washington, D.C., 2005

Shannon L. Hastings, Scott Oster, Stephen Langella, Tahsin M. Kurc, Tony C. Pan, Joel H. Saltz, "GridPacs: A Grid-enabled System for Management and Analysis of Large Image Datasets", in Proceedings of SuperComputing 2004 (SC2004), Pittsburgh, PA, 2004

Joel H. Saltz, Peter A. Covitz, "Developing a Universal Grid to Support Cancer Research", in Proceedings of Advancing Practice, Instruction and Innovation Through Informatics (APIII), Frontiers in Oncology and Pathology Informatics, Pittsburgh, PA, 2004

Joel H. Saltz, "Truth Telling About Large Scale Data", in Proceedings of Workshop on Clusters and Computational Grids for Scientific Computing, Lyon, France, 2004

Stephen Langella, Shannon L. Hastings, Scott Oster, Tahsin M. Kurc, Umit V. Catalyurek, Joel H. Saltz, "A Distributed Data Management Middleware for Data-Driven Application Systems", in Proceedings of Cluster 2004, San Diego, CA, 2004

Joel H. Saltz, "OSUCCC Biomedical Informatics Shared Resource (BISR) (overview) (poster)", in Proceedings of Great Lakes Bioinformatics Consortium, Hartland, MI, 2004

Joel H. Saltz, "Enabling Grid Data Management (Mobius GridPACS) (poster)", in Proceedings of Great Lakes Bioinformatics Consortium, Hartland, MI, 2004

Joel H. Saltz, "The Broader Role of Artificial Intelligence in Large-Scale Scientific Research", in Proceedings of The Sixteenth Innovative Applications of Artificial Intelligence Conference (IAAI-04), San Jose, CA, 2004

Umit V. Catalyurek, Tahsin M. Kurc, Joel H. Saltz, "Middleware Infrastructure for Large-Scale Data Management", in Proceedings of ASC VIEWS Alliance Forum, Salt Lake City, UT, 2004

Scott Oster, Shannon L. Hastings, Stephen Langella, Tahsin M. Kurc, Joel H. Saltz, "caBig and the Mobius Project", in Proceedings of caBIG Architecture Workspace, Video teleconference, Columbus, OH, 2004

Xi Zhang, Tahsin M. Kurc, Tony C. Pan, Umit V. Catalyurek, Sivaramakrishnan Narayanan, Pete Wyckoff, Joel H. Saltz, "Strategies for Using Additional Resources in Parallel Hash-based Join Algorithms", in Proceedings of 13th IEEE International Symposium on High-Performance Distributed Computing (HPDC-13), Honolulu, HI, 2004

Joel H. Saltz, Tony C. Pan, "Cooperative Biomedical Research, Data Virtualization and Grid Computing", in Proceedings of 2004

Xi Zhang, Tony C. Pan, Umit V. Catalyurek, Tahsin M. Kurc, Joel H. Saltz, "Serving Queries to Multi-Resolution Datasets on Disk-based Storage Clusters", in Proceedings of 4th IEEE/ACM International Symposium on Cluster Computing and the Grid (CCGrid04), Chicago, IL, 2004

John D. Fleig, Bradley Clymer, Tahsin M. Kurc, Joel H. Saltz, "Performance review of distributed medical image processing", in Proceedings of Consortium for Computing Sciences in Colleges Midwest 2003 Regional Conference, Dennison, OH, 2003

Joel H. Saltz, "Middleware Support for Data Ensemble Analysis", in Proceedings of Presentation at UT Austin, 2003

Joel H. Saltz, "Middleware for Dynamic Data Driven Application System", in Proceedings of ICCS 2003, Melbourne, Australia, 2003

Tahsin M. Kurc, Mario Lauria, Srini Parthasarathy, Joel H. Saltz, Radhakrishnan Sundaresan, "A Slacker Coherence Protocol for Pull-based Monitoring of on-line Data Sources", in Proceedings of CCGrid 2003, 2003

Joel H. Saltz, "Translational Research Informatics", in Proceedings of Ohio State University DHLRI Lecture Series, Columbus, OH, 2003

Joel H. Saltz, "Clinical Research Informatics", in Proceedings of Center for the Advancement of Genomics, Rockville, MD, 2003

Tahsin M. Kurc, Joel H. Saltz, "DataCutter Overview", in Proceedings of 2003

Joel H. Saltz, "Middleware Support for Data Ensemble Analysis", in Proceedings of Lawrence Livermore National Laboratory, 2003

Joel H. Saltz, "The Clinical Research Grid - Project Overview", in Proceedings of BRTT Commission, 2003

Joel H. Saltz, "Grid Support for Data Ensemble Analysis and Visualization", in Proceedings of 2003

Joel H. Saltz, "Clinical Research Grid", in Proceedings of Biomedical Research Institutions Information Technology Exchange (BRIITE), 2002

Joel H. Saltz, "Biomedical Research Technology Transfer Partnership Award", in Proceedings of Ohio State University Board of Trustees Meeting, 2002

Tahsin M. Kurc, Joel H. Saltz, "Enabling Biomedical Informatics with Grid Computing", in Proceedings of APIII 2002, 2002

Jyoti Kamal, Joel H. Saltz, "Impact of Physician Order Entry System and Its Associated Automation of Order Sets on Lab Orders", in Proceedings of APIII 2002, 2002

Joel H. Saltz, "Enabling BioInformatics with Grid Computing", in Proceedings of 32nd Speedup Workshop and 14th ORAP Forum, 2002

Joel H. Saltz, "Dynamic Data Driven Application Systems", in Proceedings of Clusters and Computational Grids for Scientific Computing 2002, 2002

Shannon L. Hastings, Stephen Langella, Joel H. Saltz, "Image Processing for the Grid", in Proceedings of 2002

Tech Reports

click to hide (-)

Joel H. Saltz, Shannon L. Hastings, Stephen Langella, Scott Oster, David W. Ervin, Ashish Sharma, Tony C. Pan, Metin N. Gurcan, Subhashree Madhavan, Ravi Madduri, Enrico Caserta, Justin D. Permar, Renato A. Ferreira, Philip R. Payne, Umit V. Catalyurek, Gustavo Leone, M. Ostrowski, Kenneth H Buetow, Krishnakant Shanbhag, Eliot Siegel, Ian Foster, Tahsin M. Kurc, "e-Science, caGrid, and Translational Biomedical Research", Technical Report, No. OSUBMI_TR_2008_n01, Biomedical Informatics, 2008.

Sivaramakrishnan Narayanan, Tahsin M. Kurc, Joel H. Saltz, "Support for Spatial Queries in Semantically Annotated Scientific Datasets", Technical Report, No. OSUBMI_TR_2007_n14, Biomedical Informatics, 2007.

Joel H. Saltz, Joyce Niland, Philip R. Payne, Hemant Shah, Douglas Stahl, "Rules Engine Technologies Across caBIG Workspaces - A White Paper", Technical Report, Biomedical Informatics, 2007.

Ashish Sharma, Tony C. Pan, Berkant Barla Cambazoglu, Shannon L. Hastings, Metin N. Gurcan, Tahsin M. Kurc, Joel H. Saltz, "VirtualPACS - A Federating Gateway to Access REmote Image Data Resources over the Grid", Technical Report, Biomedical Informatics, 2007.

Tony C. Pan, Justin D. Permar, Stephen Langella, Ashish Sharma, Shannon L. Hastings, Scott Oster, Berkant Barla Cambazoglu, Benjamin Rutt, Metin N. Gurcan, Tahsin M. Kurc, Joel H. Saltz, "Securing Data Access and Protecting Patient Privacy in Grid-Enabled Cancer Imaging Applications", Technical Report, No. OSUBMI_TR_2007_N05, Biomedical Informatics, 2007.

H Shimada, Kim L. Boyer, Joel H. Saltz, Metin N. Gurcan, "Computer-aided grading of neuroblastic differentiation: Multi-resolution and multi-classifier approach", Technical Report, Biomedical Informatics, 2007.

H Shimada, Kim L. Boyer, Joel H. Saltz, Metin N. Gurcan, "A new multi-resolution analysis framework for classifying grade of neuroblastic differentiation", Technical Report, Biomedical Informatics, 2007.

Sivaramakrishnan Narayanan, Tahsin M. Kurc, Joel H. Saltz, "DBOWL: Towards Extensional Queries on a Billion Statements using Relational Databases", Technical Report, No. OSUBMI_TR_2006_n03, Biomedical Informatics, 2006.

Stephen Langella, Scott Oster, Shannon L. Hastings, Frank Siebenlist, Tahsin M. Kurc, Joel H. Saltz, "Dorian: Grid Service Infrastructure for Identity Management and Federation", Technical Report, Biomedical Informatics, 2006.

Raghu Machiraju, David Lee, Catalin Barbacioru, Tony C. Pan, Srini Parthasarathy, Joel H. Saltz, "Enhanced K-Means for Clustering in Light Microscopy Images", Technical Report, No. OSUBMI_TR_2005_n06, Biomedical Informatics, 2005.

Tony C. Pan, Raghu Machiraju, Kun Huang, Joel H. Saltz, "Enhanced Registration of Serial Histology Images from Light Microscopy", Technical Report, No. OSUBMI_TR_2005_n05, Biomedical Informatics, 2005.

Sivaramakrishnan Narayanan, Umit V. Catalyurek, Tahsin M. Kurc, Vijay S. Kumar, Joel H. Saltz, "A Runtime Framework for Partial Replication and Its Application for On-Demand Data Exploration", Technical Report, No. OSUBMI_TR_2005_n04, Biomedical Informatics, 2005.

Vijay S. Kumar, Tahsin M. Kurc, Umit V. Catalyurek, Joel H. Saltz, "Design and Implementation of a Data Server Using a Peer-to-Peer Storage System", Technical Report, No. OSUBMI_TR_2005_n03, Biomedical Informatics, 2005.

Tahsin M. Kurc, Umit V. Catalyurek, Xi Zhang, Joel H. Saltz, R. Martino, Mary F. Wheeler, Malgorzata Peszynska, Alan Sussman, C. Hansen, Mrinal Sen, Roustam Seifoullaev, Paul L. Stoffa, Carlos Torres-Verdin, Manish Parashar, "A Simulation and Data Analysis System for Large Scale, Data-Driven Oil Reservoir Simulation Studies", Technical Report, No. OSUBMI_TR_2004_n16, Biomedical Informatics, 2004.

Shannon L. Hastings, Scott Oster, Stephen Langella, Tahsin M. Kurc, Tony C. Pan, Umit V. Catalyurek, Joel H. Saltz, "A Grid Based Image Archival and Analysis System", Technical Report, No. OSUBMI_TR_2004_n04, Biomedical Informatics, 2004.

Stephen Langella, Shannon L. Hastings, Scott Oster, Tahsin M. Kurc, Umit V. Catalyurek, Joel H. Saltz, "A Distributed Data Management Middleware for Data-Driven Application Systems", Technical Report, No. OSUBMI_TR_2004_n10, Biomedical Informatics, 2004.

Tony C. Pan, Daniel Cowden, Raghu Machiraju, Joel H. Saltz, "Generalized Clustering Methods for Multivariate Data", Technical Report, No. OSUBMI_TR_2004_n08, Biomedical Informatics, 2004.

Gagan Agrawal, Umit V. Catalyurek, Joel H. Saltz, "Supporting SQL-3 Aggregations on Grid-Based Data Repositories", Technical Report, No. OSUBMI_TR_2004_n17, Biomedical Informatics, 2004.

Xi Zhang, Tahsin M. Kurc, Tony C. Pan, Umit V. Catalyurek, Sivaramakrishnan Narayanan, Pete Wyckoff, Joel H. Saltz, "Strategies for Using Additional Resources in Parallel Hash-based Join Algorithms", Technical Report, No. OSUBMI_TR_2004_n05, Biomedical Informatics, 2004.

Gagan Agrawal, Umit V. Catalyurek, Tahsin M. Kurc, Sivaramakrishnan Narayanan, Joel H. Saltz, "An Approach for Automatic Data Virtualization", Technical Report, No. OSUBMI_TR_2004_n06, Biomedical Informatics, 2004.

Joel H. Saltz, "OSUCCC Biomedical Informatics Shared Resource (BISR) Proposal and Development Plan (Working Document)", Technical Report, No. OSUBMI_TR_2004_n03, Biomedical Informatics, 2004.

Xi Zhang, Tony C. Pan, Umit V. Catalyurek, Tahsin M. Kurc, Joel H. Saltz, "Serving Queries to Multi-Resolution Datasets on Disk-based Storage Clusters", Technical Report, No. OSUBMI_TR_2004_n07, Biomedical Informatics, 2004.

Manuel Ujaldon, Simon G. Ebner, Joel H. Saltz, "On the capabilities of the GPU for general purpose computing", Technical Report, No. OSUBMI_TR_2004_n18, Biomedical Informatics, 2004.

Manuel Ujaldon, Joel H. Saltz, "Mapping Irregular Computation onto the Graphics Pipeline", Technical Report, No. OSUBMI_TR_2004_n19, Biomedical Informatics, 2004.

Tahsin M. Kurc, Feng Lee, Gagan Agrawal, Umit V. Catalyurek, Renato A. Ferreira, Joel H. Saltz, "Optimizing Reduction Computations In a Distributed Environment", Technical Report, No. OSUBMI_TR_2003_n01, Biomedical Informatics, 2003.

Sivaramakrishnan Narayanan, Umit V. Catalyurek, Tahsin M. Kurc, Xi Zhang, Joel H. Saltz, "Applying Database Support for Large Scale Data Driven Science in Distributed Environments", Technical Report, No. OSUBMI_TR_2003_n02, Biomedical Informatics, 2003.

Shannon L. Hastings, Tahsin M. Kurc, Stephen Langella, Umit V. Catalyurek, Tony C. Pan, Joel H. Saltz, "Image Processing for the Grid: A Toolkit for Building Grid-enabled Image Processing Applications", Technical Report, No. OSUBMI_TR_2003_n03, Biomedical Informatics, 2003.

Sivaramakrishnan Narayanan, Tahsin M. Kurc, Umit V. Catalyurek, Joel H. Saltz, "Database Support for Data-driven Scientific Applications in the Grid", Technical Report, No. OSUBMI_TR_2002_n01, Biomedical Informatics, 2002.

Michael Beynon, Chialin Chang, Umit V. Catalyurek, Tahsin M. Kurc, Alan Sussman, Henrique Andrade, Renato A. Ferreira, Joel H. Saltz, "Processing Large-Scale Multidimensional Data in Parallel and Distributed Environments", Technical Report, No. OSUBMI_TR_2002_n02, Biomedical Informatics, 2002.

Michael Beynon, Tahsin M. Kurc, Umit V. Catalyurek, Joel H. Saltz, "A Component-based Implementation of Iso-surface Rendering for Visualizing Large Datasets", Technical Report, No. CS-TR-4249, Biomedical Informatics, 2001.

Merwyn Taylor, Joel H. Saltz, James H. Nichols, "Design of an Integrated Clinical Data Warehouse", Technical Report, No. OSUBMI_TR_2000_n01, Biomedical Informatics, 2000.


Abstracts

click to hide (-)

T Borlawsky, J LaFountain, L Petty, Joel H. Saltz, Philip R. Payne, "Leveraging an Existing Data Warehouse to Annotate Workflow Models for Operations Research and Optimization", Proceedings of AMIA 2008 Annual Symposium, Washington, D.C., United States, November 2008

Jeffrey Prescott, J Wang, Metin N. Gurcan, Joel H. Saltz, N Mayr, D Zhang, "Outcome Prediction for Radiation Treatment of Cervical Cancer by Assessing Tumor Heterogeneity and Temporal Change", SIIM 2008, Seattle, WA, May 2008

Olcay Sertel, G Lozanski, Umit V. Catalyurek, Joel H. Saltz, Metin N. Gurcan, "Computer aided grading of follicular lymphoma: high grade differentiation", United States and Canadian Academy of Pathology (USCAP), Denver, CO, March 2008

Joel H. Saltz, Scott Oster, Shannon L. Hastings, Stephen Langella, David W. Ervin, Philip R. Payne, "Integrating Heterogeneous Rules-Engine Technologies with caGRID", 2007 AMIA Annual Symposium Proceedings, Chicago, Illinois, November 2007

Philip R. Payne, Tara Payne, Jyoti Kamal, Joel H. Saltz, "A Framework for Workflow-based Clinical Research Billing Disambiguation", 2007 AMIA Annual Symposium Proceedings, Chicago, Illinois, November 2007

Kun Huang, Tony C. Pan, Joel H. Saltz, Manuel Ujaldon, Antonio Ruiz, Jose Antonio Andrades, Jose Becerra, "The GPU on biomedical image processing for color and phenotype analysis", IEEE 7th International Conference on BioInformatics & BioEngineering, Boston, Massachusetts, October 2007

L. Weng, Umit V. Catalyurek, Tahsin M. Kurc, Gagan Agrawal, Joel H. Saltz, "Optimizing Multiple Queries on Scientific Datasets with Partial Replicas", Proceedings of the 8th IEEE/ACM International Conference on Grid Computing (GRID 2007), Austin, Texas, September 2007

Berkant Barla Cambazoglu, Tony C. Pan, Ashish Sharma, Vijay S. Kumar, Olcay Sertel, Metin N. Gurcan, Umit V. Catalyurek, Joel H. Saltz, "A grid-enabled image processing infrastructure for large pathology images", APIII 2007, Pittsburgh, Pennsylvania, September 2007

Metin N. Gurcan, Tony C. Pan, Joel H. Saltz, H Shimada, "Image analysis for neuroblastoma classification: Hysteresis thresholding for nuclei segmentation", APIII, Vancouver, British Columbia, August 2006

Ashish Sharma, Tony C. Pan, Kun Huang, Metin N. Gurcan, Joel H. Saltz, "A Parallel Image Registration Framework for Terabyte-Sized Microscopy Datasets", Archives of Pathology and Laboratory Medicine (APIII 2006), Vancouver, British Columbia, August 2006

Tony C. Pan, Ashish Sharma, Metin N. Gurcan, Kun Huang, Gustavo Leone, Joel H. Saltz, "GridCAD Microscopy: A caBIG-Based System for Image Processing and Quantitative Analysis", Archives of Pathology and Laboratory Medicine (APIII 2006), Vancouver, British Columbia, August 2006

Joel H. Saltz, Tony C. Pan, Ashish Sharma, Tahsin M. Kurc, Stephen Langella, Shannon L. Hastings, Scott Oster, Metin N. Gurcan, "gridImage-Grid Computing to Middleware Support Human Markup and Multiple CAD Systems", 92nd Scientific Assembly and Annual Meeting of Radiological Society of North America (RSNA), Chicago, Illinois, November 2006

Joel H. Saltz, Tahsin M. Kurc, Stephen Langella, Shannon L. Hastings, Scott Oster, Ashish Sharma, Metin N. Gurcan, "caGrid (Cancer Grid) Middleware- Connecting Healthcare to the Grid", 92nd Scientific Assembly and Annual Meeting of Radiological Society of North America (RSNA), Chicago, Illinois, November 2006

S Erberich, Metin N. Gurcan, M Bhandekar, Tony C. Pan, Ashish Sharma, M Nelson, H Shimada, Joel H. Saltz, "Image Quantification for Neuroblastoma Assessment using DCE-MRI: A caBIG Analytical Service", 92nd Scientific Assembly and Annual Meeting of Radiological Society of North America (RSNA), Chicago, Illinois, November 2006

Kun Huang, Tony C. Pan, Ashish Sharma, Lee Cooper, Metin N. Gurcan, Joel H. Saltz, "A novel image registration pipeline for 3-D reconstruction from microscopy images", APIII, Vancouver, British Columbia, August 2006

Sivaramakrishnan Narayanan, Tahsin M. Kurc, Umit V. Catalyurek, Joel H. Saltz, "On Creating Efficient Object-Relational Views of Scientific Datasets",

Tony C. Pan, R. Sharp, R. Ridgway, Kun Huang, Raghu Machiraju, Joel H. Saltz, "Virtual Placenta: Computational Phenotyping Through Image Analysis", Advancing Practice, Instruction, and Innovation Through Informatics (APIII 2005), Lake Tahoe, California, August 2005

Stephen Langella, Shannon L. Hastings, Scott Oster, Tahsin M. Kurc, Joel H. Saltz, "Grid PACS: A Grid-Enabled System for Management and Analysis of Large-Image Data Sets", Advancing Practice, Instruction, and Innovation Through Informatics (APIII 2004), Pittsburgh, Pennsylvania, October 2004

Tahsin M. Kurc, Wolfgang Bangerth, Hector Klie, Mrinal Sen, Paul L. Stoffa, Mary F. Wheeler, Umit V. Catalyurek, Benjamin Rutt, Joel H. Saltz, Manish Parashar, "‘Where is my oil, dude?’ Supporting Dynamic, Data-Driven Oil Reservoir Simulation Studies on the Grid", Supercomputing 2004 (SC2004), Pittsburgh, PA, November 2004

Tony C. Pan, Umit V. Catalyurek, Raghu Machiraju, S. Qualmann, Joel H. Saltz, "Integrated Framework for Digital Pathology Image Analysis", Advancing Practice, Instruction, and Innovation Through Informatics (APIII 2003)

Tony C. Pan, Raghu Machiraju, Daniel Cowden, Joel H. Saltz, "Large Scale Image Analysis and Nuclear Segmentation for Digital Microscopy Images", Advancing Practice, Instruction and Innovation Through Informatics (APIII), Frontiers in Oncology and Pathology Informatics, Pittsburgh, PA, October 2004

Shannon L. Hastings, Scott Oster, Stephen Langella, Tahsin M. Kurc, Joel H. Saltz, "Grid PACS: A Grid-Enabled System for Management and Analysis of Large Image Datasets", Advancing Practice, Instruction and Innovation Through Informatics (APIII), Frontiers in Oncology and Pathology Informatics, Pittsburgh, PA, October 2004

Scott Oster, Shannon L. Hastings, Stephen Langella, Tahsin M. Kurc, Joel H. Saltz, "Data Management and Exchange in the Cancer Grid", Advancing Practice, Instruction and Innovation Through Informatics (APIII), Frontiers in Oncology and Pathology Informatics, Pittsburgh, PA, October 2004

Tony C. Pan, Shannon L. Hastings, Stephen Langella, Tahsin M. Kurc, Umit V. Catalyurek, Joel H. Saltz, "Utilizing Advances in Grid Computation to Enhance Clinical and Scientific Research", RSNA '03 (Radiological Society of North America) Scientific Assembly and Annual Meeting, Chicago, IL, December 2003

E. B. Kahwash, Catalin Barbacioru, Daniel Cowden, Joel H. Saltz, "Proteomic Patterns Analysis: A New Era of Screening Cancers", American Medical Informatics Association (AMIA) 2003 Symposium, Washington, DC, November 2003

H. Mekhjian, Joel H. Saltz, Patrick Rogers, Jyoti Kamal, "Impact of CPOE Order Sets on Lab Orders", American Medical Informatics Association (AMIA) 2003 Symposium, Washington, DC, November 2003

Daniel Cowden, Catalin Barbacioru, E. B. Kahwash, Joel H. Saltz, "Order Sets Utilization in a Clinical Order Entry System", American Medical Informatics Association (AMIA) 2003 Symposium, Washington, DC, November 2003

Catalin Barbacioru, A. Arunachalam, Daniel Cowden, E. B. Kahwash, Joel H. Saltz, "Pharmacokinetic Mapping of Breast Tumors: A New Statistical Analysis Technique for Dynamic Magnetic Resonance Imaging", American Medical Informatics Association (AMIA) 2003 Symposium, Washington, DC, November 2003

Xi Zhang, Tony C. Pan, Scott Oster, Shannon L. Hastings, Tahsin M. Kurc, Umit V. Catalyurek, Joel H. Saltz, "Grid-Based Image Analysis and Visualization", Vis 2003, Seattle, WA, October 2003

Tahsin M. Kurc, Shannon L. Hastings, Umit V. Catalyurek, Joel H. Saltz, John D. Fleig, Bradley Clymer, H. von Tengg-Kobligk, Klaus T. Baudendistel, Raghu Machiraju, Michael K. Knopp, "A Distributed Execution Environment for Analysis of DCE-MR Image Datasets",

Shannon L. Hastings, Michael Gray, Tahsin M. Kurc, Umit V. Catalyurek, Tyler Gingrich, Donn Young, Joel H. Saltz, "Grid Support for Collaborative Clinical and Biomedical Research Studies", Seventh Annual Conference for Advancing Pathology Informatics, Imaging and the Internet (APIII), Pittsburgh, PA, October 2002

Asif Ahmad, Jyoti Kamal, Joel H. Saltz, "Impact of Physician Order Entry System and its Associated Automation of Order Sets on Lab Orders", Seventh Annual Conference for Advancing Pathology Informatics, Imaging and the Internet (APIII), Pittsburgh, PA, October 2002

Robert E. Bodenheimer, Mary E. Edgerton, Mark S. Ross, Shannon L. Hastings, David Romer, Umit V. Catalyurek, Tahsin M. Kurc, Joel H. Saltz, Benoit Dawant, "Registration and Alignment of Histopathological Images", Seventh Annual Conference for Advancing Pathology Informatics, Imaging and the Internet (APIII), Pittsburgh, PA, October 2002

Henrique Andrade, Tahsin M. Kurc, Alan Sussman, Joel H. Saltz, "Multiple-Query Optimiztation Support for the Virtual Microscope", Sixth Annual Advancing Pathology Informatics, Imaging and the Internet (APIII 2001), Pittsburgh, PA, October 2001

Umit V. Catalyurek, Tahsin M. Kurc, Alan Sussman, Joel H. Saltz, "Improving the Performance and Functionality of the Virtual Microscope", Fifth Annual Advancing Pathology Informatics, Imaging and the Internet (APIII 2000), Pittsburgh, PA, October 2000

Jerry Rottman, Merwyn Taylor, John Boitnott, Joel H. Saltz, Robert Miller, Martine Uveges, "Development of a Clinical Data Repository", Advancing Pathology Informatics, Imaging and the Internet (APIII 99), Pittsburgh, PA, October 1999

Michael Beynon, Joel H. Saltz, Mustafa Uysal, Alan Sussman, "Exploration, Manipulation and Processing of Very Large Data Sets Using Filters", Advancing Pathology Informatics, Imaging and the Internet (APIII 99), Pittsburgh, PA, October 1999

[edit this page]