OSU Department of Biomedical Informatics

Lee Cooper

Graduate Research Associate

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mailing address
210 Biomedical Research Tower
460 W. 12th Ave.
Columbus, OH 43210



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Publications

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Lee Cooper, Kun Huang, Ashish Sharma, Tony C. Pan, "Registration VS Reconstruction: Building 3-D Models from 2-D Microscopy Images", Proceedings of Workshop on Multiscale Biological Imaging, Data Mining and Informatics, : pp. 57-58, September, 2006.

Kun Huang, Lee Cooper, Ashish Sharma, Tony C. Pan, "Fast Automatic Registration Algorithm for Large Microscopy Images", Proceedings of the IEEE/NLM Life Science Systems & Applications Workshop, July, 2006.

Lee Cooper, Jun Liu, Kun Huang, "Spatial segmentation of temporal texture using mixture linear models", Proceedings of the Dynamical Vision Workshop in the International Conference of Computer Vision, October, 2005.

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Tech Reports

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Lee Cooper, "A Software Utility for Image Format Conversion from SVS to TIFF", Technical Report, No. OSUBMI_TR_2007_n13, Biomedical Informatics, 2007.


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Abstracts

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Kun Huang, Tony C. Pan, Ashish Sharma, Lee Cooper, Metin N. Gurcan, Joel H. Saltz, "A novel image registration pipeline for 3-D reconstruction from microscopy images", APIII, Vancouver, British Columbia, August 2006

Publications

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Tony C. Pan, R. Ridgway, R. Sharp, Lee Cooper, Alexandra Gulacy, Ashish Sharma, O. Irfanoglu, Raghu Machiraju, Tahsin M. Kurc, P. Wenzel, A. de Bruin, Gustavo Leone, Joel H. Saltz, Kun Huang, "An Imaging Workflow for Characterizing Phenotypical Change in Terabyte Sized Mouse Model Datasets", Journal of Bioinformatics, April, 2008.

Lee Cooper, R. Sharp, Raghu Machiraju, Kun Huang, Gustavo Leone, "Visualization of Cellular Biology Structures from Optical Microscopy Data", IEEE Transactions in Visualization and Computer Graphics, January, 2008.

Lee Cooper, R. Sharp, Raghu Machiraju, Gustavo Leone, Kun Huang, Joel H. Saltz, "Reconstruction of Cellular Biological Structures from Optical Microscopy Data", IEEE Transactions on Visualization and Computer Graphics, January, 2008.

Lee Cooper, S. Naidu, Gustavo Leone, Joel H. Saltz, Kun Huang, "Registering high resolution microscopic images with different histochemical stainings - a tool for mapping gene expression with cellular structures", Proceedings of International Workshop on Microscopic Image Analysis with Applications in Biology (MIAAB’07), September, 2007.

Lee Cooper, Kun Huang, Ashish Sharma, Tony C. Pan, "Registration VS Reconstruction: Building 3-D Models from 2-D Microscopy Images", Proceedings of Workshop on Multiscale Biological Imaging, Data Mining and Informatics, : pp. 57-58, September, 2006.

Kun Huang, Lee Cooper, Ashish Sharma, Tony C. Pan, "Fast Automatic Registration Algorithm for Large Microscopy Images", Proceedings of the IEEE/NLM Life Science Systems & Applications Workshop, July, 2006.

Lee Cooper, Jun Liu, Kun Huang, "Spatial segmentation of temporal texture using mixture linear models", Proceedings of the Dynamical Vision Workshop in the International Conference of Computer Vision, October, 2005.

Presentations

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Lee Cooper, Kun Huang, Ashish Sharma, Tony C. Pan, A. Trimboli, M. Ostrowski, "Registration vs. Reconstruction: Incorporating Structural Constraint in Building 3-D Models from 2-D Microscopy Images", in Proceedings of Workshop on Multiscale Biological Imaging, Data Mining & Informatics, Santa Barbara, CA, 2006

Tech Reports

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Lee Cooper, "A Software Utility for Image Format Conversion from SVS to TIFF", Technical Report, No. OSUBMI_TR_2007_n13, Biomedical Informatics, 2007.


Abstracts

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Kun Huang, Tony C. Pan, Ashish Sharma, Lee Cooper, Metin N. Gurcan, Joel H. Saltz, "A novel image registration pipeline for 3-D reconstruction from microscopy images", APIII, Vancouver, British Columbia, August 2006

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