OSU Department of Biomedical Informatics

Shahid H. Bokhari Ph.D.

Professor

phone: (614) 688-8712
fax: (614) 688-6600

email:


web: /~shahid

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mailing address
Graves Hall
333 W. 10th Avenue
Columbus, Ohio 43210


Dr. Bokhari is a Fellow of the IEEE, Fellow of the ACM, and is a member of IEEE-CS. He is also an ISI Highly Cited Researcher in Computer Science.

Dr. Bokhari was with the Department of Electrical Engineering, University of Engineering & Technology, Lahore, Pakistan, from 1980 to 2006. He has been associated with the Institute for Computer Applications in Science & Engineering (ICASE) at NASA Langley Center in Hampton, Virginia, where he spent a total of nearly seven years as visiting scientist or consultant over the period 1978-1998.

Other institutions that he has been associated with as a researcher include the Universities of Colorado, Stuttgart, and Vienna, and the Electrotechnical Laboratory in Tsukuba.

Dr. Bokhari received the BSc degree in Electrical Engineering from the University of Engineering, Lahore, Pakistan, in 1974 and the MS and PhD degrees in Electrical and Computer Engineering from the University of Massachusetts, Amherst, in 1976 and 1978.

Research

Dr. Bokhari's research interests include Parallel and Distributed Computing. He is currently applying his expertise in these areas to Computational Biology and Bioinformatics. He is particularly interested in parallel algorithms for DNA alignment and assembly. At BMI he is currently working on a new graph theoretic model for reassortments in segmented viruses, such as influenza A.

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Grant Highlights


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Publications

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Masood Ahmed, Shahid H. Bokhari, "Mapping with Space Filling Surfaces", IEEE Transactions on Parallel and Distributed Systems, 18 (9) : pp. 1258-1269, September, 2007.

Shahid H. Bokhari, Benjamin Rutt, Pete Wyckoff, Paul Buerger, "Experimental analysis of a mass storage system", Concurrency and Computation: Practice and Experience, 18 (15) : pp. 1929-1950, December, 2006.

Shahid H. Bokhari, Benjamin Rutt, Pete Wyckoff, Paul Buerger, "Experimental analysis of a mass storage system", Concurrency and Computation: Practice and Experience, December, 2005.

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Presentations

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Shahid H. Bokhari, Benjamin Rutt, Pete Wyckoff, Paul Buerger, "An Evaluation of the OSC FAStT600 Turbo Storage Pool", in Proceedings of 2004

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Tech Reports

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Shahid H. Bokhari, Benjamin Rutt, Pete Wyckoff, Paul Buerger, "An Evaluation of the OSC FAStT600 Turbo Storage Pool", Technical Report, No. OSUBMI_TR_2004_n02, Biomedical Informatics, 2004.


Publications

click to hide (-)

Masood Ahmed, Shahid H. Bokhari, "Mapping with Space Filling Surfaces", IEEE Transactions on Parallel and Distributed Systems, 18 (9) : pp. 1258-1269, September, 2007.

Shahid H. Bokhari, Benjamin Rutt, Pete Wyckoff, Paul Buerger, "Experimental analysis of a mass storage system", Concurrency and Computation: Practice and Experience, 18 (15) : pp. 1929-1950, December, 2006.

Shahid H. Bokhari, Benjamin Rutt, Pete Wyckoff, Paul Buerger, "Experimental analysis of a mass storage system", Concurrency and Computation: Practice and Experience, December, 2005.

Shahid H. Bokhari, John R. Sauer, "Parallel Algorithms for Bioinformatics", December, 2005.

Shahid H. Bokhari, John R. Sauer, "A Parallel Graph Decomposition Algorithm for DNA Sequencing with Nanopores", Bioinformatics, December, 2004.

Shahid H. Bokhari, John R. Sauer, "Sequence alignment on the Cray MTA-2", Concurrency and Computation: Practice and Experience, 16 (9) : pp. 823-839, July, 2004.

Shahid H. Bokhari, Masood Ahmed, Saqib bin Sohail, Rizan H. Khan, Jalil A. Mirza, Muhammad Ali, "A networking laboratory for the developing world", Communications Magazine, IEEE, 42 (2) : pp. 106-113, February, 2004.

Shahid H. Bokhari, Matthew A. Glaser, Harry F. Jordan, Yves Lansac, John R. Sauer, Bart Van Zeghbroeck, "Parallelizing a DNA Simulation Code for the Cray MTA-2", Proceedings of the IEEE Computer Society Bioinformatics Conference (CSB'02), : pp. 291-302, August, 2002.

Presentations

click to hide (-)

Shahid H. Bokhari, Benjamin Rutt, Pete Wyckoff, Paul Buerger, "An Evaluation of the OSC FAStT600 Turbo Storage Pool", in Proceedings of 2004

Tech Reports

click to hide (-)

Shahid H. Bokhari, Benjamin Rutt, Pete Wyckoff, Paul Buerger, "An Evaluation of the OSC FAStT600 Turbo Storage Pool", Technical Report, No. OSUBMI_TR_2004_n02, Biomedical Informatics, 2004.


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