BMI 731/IBGP 731 Advanced Topics in Biomedical Data Management
WINTER QUARTER 2005
(http:/www.bmi.osu.edu/~umit/bmi731)
Umit Catalyurek, PhD, Department of Biomedical Informatics
Joel H. Saltz, M.D., Ph.D., Department of Biomedical Informatics
Ilya Ioshikhes, PhD, Department of Biomedical Informatics
Daniel Janies, PhD, Department of Biomedical Informatics
Kun Huang, PhD, Department of Biomedical Informatics
Catalin Barbacioru, PhD, Department of Biomedical Informatics
Diego Pol, PhD, Department of Biomedical Informatics
Tuesday & Thursday 9:00am – 10:18am
Location: 3167 Graves Hall
# |
Date |
Lecturer |
Topic |
|
1 |
January 4
|
Daniel Janies |
Biology |
|
2 |
January 6
|
Catalin Barbacioru |
|
|
3 |
January 11
|
Catalin Barbacioru |
|
|
4 |
January 13
|
Daniel Janies |
Sequence Databases |
|
5 |
January 18
|
Catalin Barbacioru
|
|
|
6 |
January 20
|
Catalin Barbacioru |
|
|
7 |
January 25
|
Diego Pol |
Phylogenetics -1 Basic theory, Optimization |
|
8 |
January 27
|
Ilya Ioshikes |
Sequence Analysis |
|
9 |
February 1
|
Diego Pol |
Phylogenetics - 2 Tree search and parallelism |
|
10 |
February 3
|
Ilya Ioshikes |
Gene Regulation |
|
11 |
February 8
|
Ilya Ioshikes |
Mass Spectrometry |
|
12 |
February 10
|
Joel Saltz |
Translational Research |
|
13 |
February 15
|
Ilya Ioshikes |
RLGS |
|
14 |
February 17
|
Kun Huang |
|
|
15 |
February 22
|
Kun Huang |
Canceled – topics will be covered in March 1 lecture |
|
16 |
February 24
|
Joel Saltz |
Software systems: Data Warehouse |
|
17 |
March 1
|
Kun Huang |
|
|
18 |
March 3
|
Umit Catalyurek |
Biomedical Informatics and High Performance Computing – Part I MSA & Virtual Microscopy |
|
19 |
March 8
|
Kun Huang |
Image analysis on microscopy data |
|
20 |
March 10
|
Umit Catalyurek |
Biomedical Informatics and High Performance Computing – Part II |
|
|
March 15 |
Exam Week |
|
|
|
March 17 |
Exam Week |
|
|
Class participation |
20% |
|
Progress Report |
20% |
|
Term Project Report |
40% |
|
Term Project Presentation |
20% |
Sample project topics: